P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATTGTGATCGATAATTCA12.72179e-06
AAAATTGTGTCACTAATGCTA12.72179e-06
AAAATTGTGTTAATACAGTTA12.72179e-06
AAAATTGTTGCTAGTCGCTAA12.72179e-06
AAAATTGTTGGATACAAGATA12.72179e-06
AAAATTGTTTCGATCTTCAGA12.72179e-06
AAAATTTAAACATCAGTGTCA12.72179e-06
AAAATTTAAATATTACATCGA12.72179e-06
AAAATTTAAATTTGACATTCA12.72179e-06
AAAATTTAACAGTTCTTTTAA12.72179e-06
AAAATTTAACGTGCGTTCTTA12.72179e-06
AAAATTTAACTCTTTCGGTTA12.72179e-06
AAAATTTAAGGCAGATATTAA12.72179e-06
AAAATTTAATCACGACTATCA12.72179e-06
AAAATTTAATCTCCTATGATA12.72179e-06
AAAATTTAATTGATTTTACTA12.72179e-06
AAAATTTACAGTATATAACCA25.44358e-06
AAAATTTACATTTACTCTTCG12.72179e-06
AAAATTTACGTGTTATCCTAA12.72179e-06
AAAATTTACTAGTCTACATTA12.72179e-06
AAAATTTACTGAGCTAACGAA12.72179e-06
AAAATTTACTTTTATACAAAA12.72179e-06
AAAATTTAGAGTTAGTCCCAA12.72179e-06
AAAATTTAGCACATTTAAAAA12.72179e-06
AAAATTTAGTAGGCGTCGATA12.72179e-06

Read fractions use all reads in this source file as the denominator.