P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACAATTAAAAACACTTATA12.72179e-06
AAACAATTACCAGTCGTCAGA12.72179e-06
AAACAATTATTTCGCTATTAA12.72179e-06
AAACAATTCGGCTAAGCACAA12.72179e-06
AAACAATTCTGAGGTTAAAGA12.72179e-06
AAACAATTTTATTTTACCCCA12.72179e-06
AAACACAAGCAACTTTTACAA12.72179e-06
AAACACAAGGGGTAGGGTCAA12.72179e-06
AAACACAATAGTGCATACAGA12.72179e-06
AAACACAATGTCAAGACTAGA12.72179e-06
AAACACAATTACGGGTCACTA12.72179e-06
AAACACACATCAATCAAATCA12.72179e-06
AAACACACATTGAGGAACATA12.72179e-06
AAACACACGAATCCCTATTCA12.72179e-06
AAACACACGACAATTAAACCA12.72179e-06
AAACACACTCCAAGGTTATAA12.72179e-06
AAACACAGATTATTAAGAATA12.72179e-06
AAACACAGCCGGTTGTTAACA12.72179e-06
AAACACAGCTTAGATACCAAA12.72179e-06
AAACACAGGGGGAAATACGAA12.72179e-06
AAACACAGTAGTGTGGTATCA12.72179e-06
AAACACAGTCGCACGTCTTCA12.72179e-06
AAACACATAAAGATTTGTAAA12.72179e-06
AAACACATAATAATGAATAAA12.72179e-06
AAACACATCCTTTACTTAAAA12.72179e-06

Read fractions use all reads in this source file as the denominator.