P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACTCCCGGAAAGAAAAGTA12.72179e-06
AAACTCCCTGTCCTGTTATAA12.72179e-06
AAACTCCCTTGTTGATCATCA12.72179e-06
AAACTCCGACAATATATTATA12.72179e-06
AAACTCCGATAATGAAACCCA12.72179e-06
AAACTCCGCGATGGACTGCAA12.72179e-06
AAACTCCTAGATTCTGCTCAA12.72179e-06
AAACTCCTCGCATGAATTAAA12.72179e-06
AAACTCCTCTTTGGGGCTGCA12.72179e-06
AAACTCCTGATATATTCAGTA12.72179e-06
AAACTCCTGATCGAGCTCATA12.72179e-06
AAACTCCTTAGTATAACCTTA12.72179e-06
AAACTCGAAGGACATCGATCA12.72179e-06
AAACTCGAGCTTGTGATATGA12.72179e-06
AAACTCGAGGTGGGTCTGGTA12.72179e-06
AAACTCGAGTGAAATGAATGA12.72179e-06
AAACTCGATTGGCACTAACAA12.72179e-06
AAACTCGATTTTGTGTTTCGA12.72179e-06
AAACTCGCACCCCATGGAGTA12.72179e-06
AAACTCGCTTTTTTTATTAAA25.44358e-06
AAACTCGGCCGGGAATCCCCA12.72179e-06
AAACTCGGCTTTCTGTCATAA12.72179e-06
AAACTCGGTAAGGGTCAGTCA12.72179e-06
AAACTCGGTGAATTAATAAAA12.72179e-06
AAACTCGTAATAAGTTTATCA12.72179e-06

Read fractions use all reads in this source file as the denominator.