P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGAATGTTTTCTGTATATA12.72179e-06
AAAGAATTAGTATAGCTGTCA12.72179e-06
AAAGAATTATTAGCAATATGA12.72179e-06
AAAGAATTCCTACTCTTCATA12.72179e-06
AAAGAATTCCTTAGTAGTGCA12.72179e-06
AAAGAATTCTTTTTATACTCA12.72179e-06
AAAGAATTGAAAGTAACATAA12.72179e-06
AAAGAATTGTTCAATCTCATA12.72179e-06
AAAGAATTTAATACAAGGAGA12.72179e-06
AAAGAATTTCCTAATTTCGAA12.72179e-06
AAAGAATTTCCTTGAATGATA12.72179e-06
AAAGAATTTCGTCTCGGTGAA12.72179e-06
AAAGAATTTTAGCTAAATTCA12.72179e-06
AAAGAATTTTATATCAACTCA12.72179e-06
AAAGAATTTTCTTCCTTAGAA12.72179e-06
AAAGAATTTTTTTTAAGATGA12.72179e-06
AAAGACAACAAATTACATATA12.72179e-06
AAAGACAATCACCATGCAATA12.72179e-06
AAAGACAATTGGGGTAAAGTA12.72179e-06
AAAGACACAAGGTCAGGTCCA12.72179e-06
AAAGACACATTATTGTTAAGA12.72179e-06
AAAGACACGACTACCATTCCA12.72179e-06
AAAGACACGATTAAGCATACA12.72179e-06
AAAGACACGTAGATTATGGCA12.72179e-06
AAAGACAGAAAGACTTCTAGA12.72179e-06

Read fractions use all reads in this source file as the denominator.