P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAATCATGATGAAATTATA12.72179e-06
AAAAATCATGTTGCTCTGGCA12.72179e-06
AAAAATCATTTACAGCGTAAA12.72179e-06
AAAAATCATTTTTTTTTATAA12.72179e-06
AAAAATCCAACCCGTACCTTA12.72179e-06
AAAAATCCACGTGATGTCCTA12.72179e-06
AAAAATCCCATTTGTTCACGA12.72179e-06
AAAAATCCGAACCTATCGGGA12.72179e-06
AAAAATCCTAAGACTGAAGTA12.72179e-06
AAAAATCCTATATCCAGGATA12.72179e-06
AAAAATCCTCAAGGGAAAGTA12.72179e-06
AAAAATCCTCTTTCGAAACTA12.72179e-06
AAAAATCCTTTACGTATTAGA12.72179e-06
AAAAATCGAACGTAGACAAGA12.72179e-06
AAAAATCGACATCAACTTTAA12.72179e-06
AAAAATCGACTTCCTTCTATG12.72179e-06
AAAAATCGCGTACTATTACAA12.72179e-06
AAAAATCGGATGTTAAGACAA12.72179e-06
AAAAATCGGGTAGTCGAAGCA12.72179e-06
AAAAATCGTAACAGGATGTTA12.72179e-06
AAAAATCGTGTTTTTGCCAGA12.72179e-06
AAAAATCTAGGAGAAGCATTA12.72179e-06
AAAAATCTCCAATCTCCTCAA12.72179e-06
AAAAATCTCTGTTTTTCTTTA12.72179e-06
AAAAATCTGAAACTCGATTTA12.72179e-06

Read fractions use all reads in this source file as the denominator.