P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTATTGTCCTTTTAGACA12.72179e-06
AAAGTATTGTTTGATTAACTA25.44358e-06
AAAGTATTTACCATAGATTTA12.72179e-06
AAAGTATTTACTATCAGCTAA12.72179e-06
AAAGTATTTATCTTATACATA12.72179e-06
AAAGTATTTCACCATGGAGAA12.72179e-06
AAAGTATTTTATGACTGGTGA12.72179e-06
AAAGTATTTTCTTTGTCTGCA12.72179e-06
AAAGTCAAAGGTACCATATTA12.72179e-06
AAAGTCAACTCAATTTGTTCA12.72179e-06
AAAGTCAACTTCCAAGTCCCA12.72179e-06
AAAGTCAAGAAAAAGATTTTA12.72179e-06
AAAGTCAAGAGTTCTAGTTCA12.72179e-06
AAAGTCAAGCAGTCACGTTTA25.44358e-06
AAAGTCAATAAATCTCATCGA12.72179e-06
AAAGTCAATATATTTCGTTTA12.72179e-06
AAAGTCAATCCGAATTAAAGA12.72179e-06
AAAGTCAATCTTAAATATTTA25.44358e-06
AAAGTCAATTCTCTTGTTGCA12.72179e-06
AAAGTCAATTTGGTCTTTGTA12.72179e-06
AAAGTCACAGGTAGTTCATGA12.72179e-06
AAAGTCACATACCCAACATAA12.72179e-06
AAAGTCACATTAAAGGTCAAA12.72179e-06
AAAGTCACCAGTAAGGGGGTA12.72179e-06
AAAGTCACGAACCCGTAATTA12.72179e-06

Read fractions use all reads in this source file as the denominator.