P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTCCAGGAATTCCCTTAA12.72179e-06
AAAGTCCATACACAAAGTGTA12.72179e-06
AAAGTCCCTATACGTATGAAA12.72179e-06
AAAGTCCGCCACAATTTTGGA12.72179e-06
AAAGTCCGTCGTAAGCAACCA12.72179e-06
AAAGTCCTCTAAAACCTTCAA12.72179e-06
AAAGTCCTGTCTCTTTCGTGA12.72179e-06
AAAGTCCTTGTTATCATGAAA12.72179e-06
AAAGTCGAAAGTTACATATGA12.72179e-06
AAAGTCGAAGGATCTGGGGGA12.72179e-06
AAAGTCGATTTAATGCAATCA12.72179e-06
AAAGTCGCTGTCTTTTGTTTA12.72179e-06
AAAGTCGGATTGCTGGATGTA12.72179e-06
AAAGTCGGCTAGCGTGAAGGA12.72179e-06
AAAGTCGTAGTACTACATTAA12.72179e-06
AAAGTCGTCTAAAGTGTGAGA12.72179e-06
AAAGTCGTTAGTACTCAGTAG12.72179e-06
AAAGTCGTTAGTCTCTATAGA12.72179e-06
AAAGTCTAAATCTTAAAGTAA12.72179e-06
AAAGTCTAAGATTAATAGGTA12.72179e-06
AAAGTCTAAGGTTATAAATGA12.72179e-06
AAAGTCTAAGTTAACAAAATA12.72179e-06
AAAGTCTAATCGGGTTCGAGA12.72179e-06
AAAGTCTAATCTTGTTTGGGA12.72179e-06
AAAGTCTAATGCTGTTCAACA12.72179e-06

Read fractions use all reads in this source file as the denominator.