P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAATTACGTAGGCCAAAAA12.72179e-06
AAAAATTAGATTCATCCTGGA12.72179e-06
AAAAATTAGCATGGACCTCAA12.72179e-06
AAAAATTAGGTCATTAGTGCA12.72179e-06
AAAAATTAGTAGACACACAAA12.72179e-06
AAAAATTAGTGATACTTTCTA12.72179e-06
AAAAATTATACTGACCATATA12.72179e-06
AAAAATTATCTATCGTGTAAA12.72179e-06
AAAAATTATGAATTAACATAA12.72179e-06
AAAAATTATTACTGGTAGGAA12.72179e-06
AAAAATTATTATGTTAGTTTA12.72179e-06
AAAAATTATTCAAATACGTGA12.72179e-06
AAAAATTATTCTAATGTCCTA12.72179e-06
AAAAATTATTGACTATGTACA12.72179e-06
AAAAATTATTGTTAAGGATCA12.72179e-06
AAAAATTATTTCAGTTCCAAA12.72179e-06
AAAAATTCACGGATCTTATGA12.72179e-06
AAAAATTCACTTCAATTTACA12.72179e-06
AAAAATTCAGGGATTGAATAA12.72179e-06
AAAAATTCATTAAGAACTGTA12.72179e-06
AAAAATTCCGTTTTGTTTTTA12.72179e-06
AAAAATTCCTTGAGTTAAGTA12.72179e-06
AAAAATTCGATTAGTGTTACG12.72179e-06
AAAAATTCGTTATCAATCTAA12.72179e-06
AAAAATTCTAACGACCACAGA12.72179e-06

Read fractions use all reads in this source file as the denominator.