P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAACGAGGATGTTTTACACA12.72179e-06
AAAACGAGGTAGTTGTAGACA12.72179e-06
AAAACGAGTACGACATATAAA12.72179e-06
AAAACGAGTCCGAAAACAAGA12.72179e-06
AAAACGAGTCCTCATTAGGTA12.72179e-06
AAAACGAGTCCTGCTACATAA12.72179e-06
AAAACGAGTCGCACTGACGTA12.72179e-06
AAAACGATACCTTGGTCTAGA12.72179e-06
AAAACGATGAATATCTTTATA12.72179e-06
AAAACGATTAGTCAGGCAATA12.72179e-06
AAAACGATTGTGCTACACCGA12.72179e-06
AAAACGATTTTTCAATGACCA12.72179e-06
AAAACGCACCCTATTGAAGAA12.72179e-06
AAAACGCATTCCTACCTGATA12.72179e-06
AAAACGCGCGATACCTTACGA12.72179e-06
AAAACGCGTCAGTAAACTCTA12.72179e-06
AAAACGCTGTACTGCGTGTGA12.72179e-06
AAAACGCTGTTTAGTCGCCCA12.72179e-06
AAAACGCTTATATCGAGTTCA12.72179e-06
AAAACGCTTATCGGTTATTTA12.72179e-06
AAAACGCTTTGAAATTTGTAA12.72179e-06
AAAACGGACACTATTTTATGA12.72179e-06
AAAACGGACCTACTGGTTTAA12.72179e-06
AAAACGGACTGCATTTTTGGA12.72179e-06
AAAACGGAGTTAATACAAGGA12.72179e-06

Read fractions use all reads in this source file as the denominator.