ATF3_GABPA
CAP-SELEX sample ATF3_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCCGCTGCCCTGCAGTCCATGACGTCACCGGATGTGCCTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:8c12f87eb679
|
40 | — | — | — |
|
TTACGTCATTTCCGGTCACATCACTTCACTTCCGCCTCAC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:e5f15f007f17
|
40 | — | — | — |
|
CGCGCTCAACTTCCGGTTCCGCAACGCTTACGTCATTGCC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:d331a42422a0
|
40 | — | — | — |
|
CAACCCCACTTCCGGTGCGCCGATGACGTAAGCACCCATA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:b418b0340a47
|
40 | — | — | — |
|
GCATTGCGCGGACACAGTCTGCACCGGAAATGACGTAAGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:0d735e731c9a
|
40 | — | — | — |
|
GGCCTACTTCCGGTATTGCATGACGTCATCGCGAGACTCC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:1c57c3b98229
|
40 | — | — | — |
|
GCCTCCTTTTTCCACCCTCACTTCCGTTTCCGGTGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:a0f359d7212f
|
40 | — | — | — |
|
CGGATATCCGCTCCCACTACATTCCGAAATTGCTTACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:5abe098779f2
|
40 | — | — | — |
|
TACGCACCGGAAGTAGCATAGACGACCACGGTCTGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:b372280d8b07
|
40 | — | — | — |
|
CACCCCTTACCTTCCGCTTCCGGTCCGCTCCGCTTACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:02c875013c97
|
40 | — | — | — |
|
CGCATTACCACCGTATGTTATACATCCGGTCGCGTGCCGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:4a7ffdd40f8c
|
40 | — | — | — |
|
GTTCACTTCCGGTTACACCACACACAACTACGCTTACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:5536a61e6f41
|
40 | — | — | — |
|
AAAACGCTTGCCTTCCGGCGCGATTACGTCACTTCCGCCT
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:57f328de459a
|
40 | — | — | — |
|
ACTGCGCATACCGGAAATGGCGTAGGGCTGACGTCACGCA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:aa2f00e9a70a
|
40 | — | — | — |
|
TAGGACCCACTTCCCCTCCAACCTCACTTCCGGTTACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:8431c8981c41
|
40 | — | — | — |
|
ACCGGAAGTCACGTTAGACCGGAAACCGGCCCATTACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:4a5a3ce2fdb0
|
40 | — | — | — |
|
GGTTATTACTTTCCGCTCATTATGACGTCACTTCCTGTGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:8b23370ed0f4
|
40 | — | — | — |
|
CTCACTTCCGGTCCCACAACGGACATGACGTGATACTACC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:a37669f2cd33
|
40 | — | — | — |
|
CACATGGCACTAACTTTACGACTTCCGGTCTGACGTCATC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:9b9bc1b915a8
|
40 | — | — | — |
|
CCTCACGTGCCACACATACAACCGGAAATGACGTCAGACC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:e27bf4da57e2
|
40 | — | — | — |
|
GCTTATAACTGTGCCACTTCCGGTTGGATGACGTCACCGA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:00a2257a5ddd
|
40 | — | — | — |
|
CTCCCTTATTGACCGGAAGGTTCCGTGGCCTTACGGACTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:ce384018b085
|
40 | — | — | — |
|
AGCACCGGAAGTCCGTCCAGTACGTCCGGCGCATGACGTA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:0086ee032620
|
40 | — | — | — |
|
CCGCCACTTCCGGTCCGCGAGGTGATGTCACCGGCGCGCG
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:59f8a06dc67e
|
40 | — | — | — |
|
ACCGGAAACCACAATGACGTCACCCACTACAGCTTCCGCC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:d1243c7e56fe
|
40 | — | — | — |
|
CTCGCAACATCCGGTGCATGCCGCGCCTCACTATGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:8df9be131457
|
40 | — | — | — |
|
CCACCTGCTCAGCCATGGATGACGTCACCTTCCGGCGGAA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:72c9a21d2ca6
|
40 | — | — | — |
|
ACGTGGGGCGTGACGTCACCGGAAGCAGTCTGTATCGTGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:b21f62a7e4c8
|
40 | — | — | — |
|
TACCTGCCCGTTCCTCGCTTCCGGTGACGTCATCGTCAGT
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:86e53694db16
|
40 | — | — | — |
|
CGCTTCCTTCCATGACGTCATTTCCGGTCCCCCCCTGCTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:fe84e33c1a5a
|
40 | — | — | — |
|
GAAATTGCTACTGCAGATAGGCACTTCCGGCCGTGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:b068f16cec98
|
40 | — | — | — |
|
AGCCACATCCGGCCATACGGCTTACATCCGCCATGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:acd3d6234fc0
|
40 | — | — | — |
|
GCTGACGTCATCGACACGCTTACTTCCGGCCCTCTTCCGG
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:68e9bd7e88de
|
40 | — | — | — |
|
CAGCGATACCGGATGTGATGACATCACCCTTACCGGATGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:88f14ce16627
|
40 | — | — | — |
|
AACTGCATCTCGCTTCCGGTAGCATGACGTCACGCCCCCA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:bc68821c8718
|
40 | — | — | — |
|
CTCTACCGATAAGCAGACTTCCGGTCAAGTGATGTCACAC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:701b81acb5c1
|
40 | — | — | — |
|
CCTTTATCCTCTTACGTCACTTCCGGTATGCATCGATGAG
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:83daf88d11fd
|
40 | — | — | — |
|
GCACTTCCGGTCATTGAACATATTACGTCACCGTTGACGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:9487e03b966e
|
40 | — | — | — |
|
GCAACCGACAAACGGCGTGACGTCACATCCGGTTATCGCC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:3afa86f14caa
|
40 | — | — | — |
|
CGTACACTTCCTTCCGGCGAACTATATCACCGTTGACGTC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:c588c9d9a1e0
|
40 | — | — | — |
|
CAACCGGAAGTGACGTCACTGCGGGTTCAGCAGCCACGGC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:b29321c7b53f
|
40 | — | — | — |
|
GCACGTACGCCACATGCACGACACGACCGGAAGTGACATC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:e744ebd471fe
|
40 | — | — | — |
|
GTCCGCCGCACAAAACGGAAGTGCGCTGACGTCATCGTAA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:57ba41fabfce
|
40 | — | — | — |
|
CAAACCGGAAGCAGGCTTACCGATGACGTCATCAGCAGGA
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:fab92cac5a83
|
40 | — | — | — |
|
GTCCATATCCTCGCATGACGCCCCCTTCCCTGCCTGGCCT
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:35c083776406
|
40 | — | — | — |
|
CGGTCCCCCGCCCACTGACGTCACTTCCGCTCAGTTGCAC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:c3c7ea762a7f
|
40 | — | — | — |
|
GTACCGGAAACACTGTTTTCGGTCACGCAATGACATCATG
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:c071c9bf5960
|
40 | — | — | — |
|
CTGACGTCACTTCCGGTCCACACGCCAACTTGACACGCGT
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:d40ae963a7bc
|
40 | — | — | — |
|
TGCAGCTGTCCTTCCGGCCCAAGCCACTTCCGATGACATC
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:e56428c8522e
|
40 | — | — | — |
|
CACCAGGCGACACCACTTCCGGTCGGCATAATGATGTCAT
PANAPTA:P18847:ATF3_GABPA:PRJEB66722:R3:854b4b197485
|
40 | — | — | — |
SELEX rounds
R3 ·final