ATF4_GABPA
CAP-SELEX sample ATF4_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCCACCAGCCGCACCCCCGCCCCCCACCTGTTTGCAAACA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:96af33533527
|
40 | — | — | — |
|
GCAGCGTTGGTCTTCCGGCACAGCACGGGAAAACCGTTGT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:5ea68cdc764b
|
40 | — | — | — |
|
CGTAACCGATAACAACATGTGCCGGTTCCGGTATGAAAAC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:7833adb1df32
|
40 | — | — | — |
|
ACGTGGGATGCCGTATGTGCCACACATCCGGCTGACGACC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:5a1848241500
|
40 | — | — | — |
|
GCTGCCCGATAAGATTTCTTCCGGTCGTGATGTCTCGGAC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:800f89d09e91
|
40 | — | — | — |
|
GCCGGATGTTAGATCAGAACTTACGGCATGATCCCTCAGG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:2ecb73e095ba
|
40 | — | — | — |
|
ACGATCAGCCGTAAGTAAACATCCGGCCATCGTACCGATT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:58d60357fe50
|
40 | — | — | — |
|
AGGCAGCCACGTAAGCTACCACTTCCGGTCCGGCGGAACA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:85954a41b68c
|
40 | — | — | — |
|
GCTAGCACAATGAGATAACCTCCATGACACGACAGGAGAT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:313d31f46d2c
|
40 | — | — | — |
|
ACGGTGCCGCCGGAAGTACTACAGTAGTACTTACTGCGGA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:55d33fffe45f
|
40 | — | — | — |
|
AAGCTAGACCGTTAAATGGACGAGACTTCCGGTCTAACAG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:d77db2df7bec
|
40 | — | — | — |
|
GAGGCCGGATGTCAACATACGGGCTTACCGTAGCCTGAGA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:f134b981160c
|
40 | — | — | — |
|
GGAAGGAATCGGCTTCCGTAAGCTAAAGCATCCGGCAGAA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:d18f44b32773
|
40 | — | — | — |
|
GAACCGTCGCATGTCCGTAAATTCTATTTCCGGTCCATCT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:875cc8d57e31
|
40 | — | — | — |
|
GACGGTCACTTCCGGTTTGGCAAACCGGCCAAGTTGTCCG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:5dbbbd3af3ca
|
40 | — | — | — |
|
AGGAATTGCCTTACGCCGGAAGCGTACCGCTTACGGACTC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:8be46b030718
|
40 | — | — | — |
|
GAATTTCCCGGTGTGTCACCGGAAATCCCTCACCCGGTGT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:62adfd61e116
|
40 | — | — | — |
|
CACTCGCCCTGAAGCATGCTTCCGGTCAAGTTGTAGAGAA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:a90a321d68ef
|
40 | — | — | — |
|
GCTTCCGGTTACCTACCGTAAGCTCCGAAGCGAGGTGGGA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:3c982f5b1fe0
|
40 | — | — | — |
|
GCCATTGCCGGAAGTCTACTTCCGGCACAGTCATCATACA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:2912f60e1357
|
40 | — | — | — |
|
ATGTCCGTAAGTAGAACTGCCGGCCATGACCTCGCCCACC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:7e626be27032
|
40 | — | — | — |
|
GTCACCGGAAGCACATGCGCTTACGGGTATGATGAGAAGC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:5f609ab26a5b
|
40 | — | — | — |
|
TATCTCCACTTCCGGCTGAGCCGTAAGTGTGATGGGCACC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:805f471d32a8
|
40 | — | — | — |
|
GACTCGTAAGTGAAATCCACTTCCGGTACCACGTATGGCA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:9800a377b45b
|
40 | — | — | — |
|
CCATTACAGGCGACGTAAGTTCGCACTTCCGCTGCGCCAA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:c78a8272fd36
|
40 | — | — | — |
|
CCGTAAGCCTACTTCCGGTGTGAACATCACGTAGGGACCA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:68de6f3db943
|
40 | — | — | — |
|
TCGATAGCATGACCTACCGAGTAAGTGCACTTCCGGTAGG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:44cb5ce983f6
|
40 | — | — | — |
|
GTACGAGCGATAAATCCCAGTGTTTCCGCTCTACACCGCA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:af69427e490e
|
40 | — | — | — |
|
GCAAGGATTACTACTAGCCGTAAACTCGTTTCCGGCGTGG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:2459a6aee509
|
40 | — | — | — |
|
GTCACTTCCCCCCTATAACGGTAGGAGCATAAGTGACACA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:afb3a302b164
|
40 | — | — | — |
|
AGTTACCGGAAGTGACGCTTACGGTTACAACGTACGATAG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:bcc66bd60d71
|
40 | — | — | — |
|
AGCAGCTCACTCGGCCTAACTCCGAGACGAACAGACGAAT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:cafb2d4b0376
|
40 | — | — | — |
|
GACGGACTACCGGAAGTATATTTACGGTGATCATAGCTAC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:65f3b0bdf00d
|
40 | — | — | — |
|
CATCTTATCCAGACCGGATGCATCCGCATACGGTTACGGC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:57f58378e7b9
|
40 | — | — | — |
|
GACGGTCCGTAACTAGACTTCCGGCCCCTTCTAGCATGCG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:eb09bb1b5cfe
|
40 | — | — | — |
|
GTCGGTATGTTCCGGATGTCGACATACGGAATTGCGCAGC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:54b174700e3b
|
40 | — | — | — |
|
TACCCCGTAAGTGAGGCCACTTCCGGCTGCGTGCACTGTC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:c6ba3b93c07e
|
40 | — | — | — |
|
CAGCGGAAGTCGCCCCGTTTCCGGAGACTTACGTCTGGTT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:19b5d8647251
|
40 | — | — | — |
|
AATAATTTCCGGTATCTTACCGTGAAATACTAACAACACT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:7231967c523c
|
40 | — | — | — |
|
AGCCCCGTAAGTTACTCACTTCCGGGTAGCACGAAGCGTA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:1c4e084e3527
|
40 | — | — | — |
|
TAACACGTGAAGTATCACTTCCGGTTCTACGCCTAGGTGT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:1f60398b2791
|
40 | — | — | — |
|
CAAAGAAGGGACCGACCATCGGCTCTACATAAATAACTGC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:0887bc683d03
|
40 | — | — | — |
|
CCGTCTAAAAACGCTTCACATCCGGTGTAACCGTATGTGA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:fbe8da159dbd
|
40 | — | — | — |
|
AATCTGTCAACCGGAAATTACGTTTACCGGGGGACGAGCG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:d2a6c1baf148
|
40 | — | — | — |
|
TGCGCACTTCCGGTTTGCCACATACCCCCGTAAGTGGCGC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:3f6d436d38fa
|
40 | — | — | — |
|
CAGTTCGTTCCGTAACCAACGCTTCCGGCACGCCAACGCC
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:3750c8a1ad36
|
40 | — | — | — |
|
GTATTTTATCGTGCATTGTTGAGTACATCGGGATAAGGCG
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:fe09ac35b3ff
|
40 | — | — | — |
|
TGCCGTAAGCGATAGCTAGCTTCCGGCAACACGTAGTAGT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:7d87077b4b36
|
40 | — | — | — |
|
GCAACTGCGTAAGGCTAAGAGATCTTCCCCTTCCGAAAGT
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:27ef9e5e6612
|
40 | — | — | — |
|
CGAATCGGCATCCGTAAATGAGATGATTTCCGGTAGCTAA
PANAPTA:P18848:ATF4_GABPA:PRJEB66722:R3:3d01bf5393b5
|
40 | — | — | — |
SELEX rounds
R3 ·final