ATF4_HOXC10
CAP-SELEX sample ATF4_HOXC10 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCTTGCGTTTATGTACTGCTCCTAACCGTCCGCTTTACT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:0cf2b561d7e6
|
40 | — | — | — |
|
CGCATGAATGACGTTATTACCCTCACCCTTAATGACGTCA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:a2a8b516f34c
|
40 | — | — | — |
|
ATGACGTCAGATTTTCAACTAACGTCACAAGCACTTGACA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:f0094f4eca76
|
40 | — | — | — |
|
TCGATAATTTATGGATCCTGATACTCTCGTGATTTTATAG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:6d24507ba6bb
|
40 | — | — | — |
|
ACCTGAAATTAGTGTGCGCCGAGCGACCAGTGGTGCATGA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:30469f426b9e
|
40 | — | — | — |
|
CGCACCTCACCTACCCCAGTCACTTGAAGTTACTCAGCGC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:bdafbf69951b
|
40 | — | — | — |
|
GGTGCTCACTGCGCACGATCTATCACTCGAATGTAGGTTC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:cd5bb2485f30
|
40 | — | — | — |
|
CTCATTCCAGACGTGCAGGACCACGCACGATACAATGGGT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:e6e356859058
|
40 | — | — | — |
|
TCCGCCAGCCACCCATGCACGCACCACGCCTCCTAATGCA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:17ba98c8813e
|
40 | — | — | — |
|
TAGCCGGCCGATGACGTCATGTGATGCTTAACGTCATCAT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:1f8c6315dcd4
|
40 | — | — | — |
|
GCCGCGTTAACGACCTCTCTTTACGTCATTATTCGTCACT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:0f754a213368
|
40 | — | — | — |
|
CGTCGTAAAACATTTTACGACCGTGGTGCCTATTACGAAC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:cfa37fe55768
|
40 | — | — | — |
|
CCCGTACATCGTAAACCCACTTACTCTCCACCTGCGGATC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:adf025e4df73
|
40 | — | — | — |
|
TCCAGTGTACCATTTACGATCCACCCGTCTCCCCTTCCCT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:0a088fc580c8
|
40 | — | — | — |
|
CCACTCGACGACCTCCGACCCCCAGCTACTTCCTATCCTC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:6e17b28d29c5
|
40 | — | — | — |
|
GAGGCTACCATGCGATGTAGCTGCTTCGTAAGCTTTGCCA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:a8d3dcb27885
|
40 | — | — | — |
|
TGCCGGCGATGATGTCAGCGCTTGCGTCATCATCCCATCG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:0bcae85e2b72
|
40 | — | — | — |
|
CCTCACTTTGCTAATGGGCTAATTGATGTTTACACTGTGA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:2e15f0980b2a
|
40 | — | — | — |
|
CGCTACTAACTGCATGATGGACATGCGGTACACGTCATTG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:d2c1314553c3
|
40 | — | — | — |
|
CACGTTTATCGTTATTCTCACAATTCGTTAGGCACTCATC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:ba74b7341817
|
40 | — | — | — |
|
CCATTAAGCCCCTACCCGTCGTGACTGACTCCTAGTCCGC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:c7c5e6dfaa36
|
40 | — | — | — |
|
CCGTCAACTTCGCACATCACCCTCTGACCCGTGGCACCAA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:f3b81617b3a1
|
40 | — | — | — |
|
ACACTGCACGCAGCCAGACACAGCACATCTAACCTACAGC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:f2eda2122c1d
|
40 | — | — | — |
|
TGATCGCGGACCGCCTACCATGATGTCATACGACATCCAA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:91f65478ba60
|
40 | — | — | — |
|
GCGTACCTATGACACATTTTTACGACCTGACGTCATTTCG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:b9c94b132153
|
40 | — | — | — |
|
CCCGCCTCGCTCGTAAAAATTTCACGACCCTGCACGTCAT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:52227b1e7750
|
40 | — | — | — |
|
CGGATATTACGTCATCCCGAACGTGATGACGTTAGATTCT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:7e5f0a4834a3
|
40 | — | — | — |
|
CCTGACGTGCATCGATGATATGAGATCGCGTCATAATGGA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:3607393d4af7
|
40 | — | — | — |
|
GATGACGTGACACATGCGTAAGCTTGGGGCATTCTTGCTG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:e477ba33f09c
|
40 | — | — | — |
|
CTTATCCCATTCTTTAAGCTACCTTCCCTTAACACAACTC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:22680c3a2651
|
40 | — | — | — |
|
TCCCCCCTCCCCTCCGCCCCGTCCGGCTGCATACACTCTT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:5368f8b45efa
|
40 | — | — | — |
|
TTAACGTAACTACTGCTCATTTAATTGTTTAACGACCGTA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:cb0d12a1392a
|
40 | — | — | — |
|
GCCGTGACGAGACACGCATCAGATACCCTAATCGACAGTC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:d0af7a58cfac
|
40 | — | — | — |
|
ATGACGTAACCCTGACGTCATGGAGTCGTTACCCGTGGCA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:41c79196055a
|
40 | — | — | — |
|
TGCATAAAAAATTTATCGATGTCAATTTCGATGTGTAGCG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:72498b0d2535
|
40 | — | — | — |
|
GATGCCACCACAATGTTTAATAGCCTTCCACCTGCCCTGC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:0ecab2b7298a
|
40 | — | — | — |
|
TGCCATCGAACATGCCCGCGTAGTGCCTGACGTCATTCAC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:c02ed59ac973
|
40 | — | — | — |
|
TCAAGGCTACCTTTCTTTTTACGACTTGTTGGATGACGTG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:d4f6788df6f8
|
40 | — | — | — |
|
CACGCTACATCACATGGATGATGTTATCTGATGTTGTGCT
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:6ed757cbe998
|
40 | — | — | — |
|
AGACACTGACGTCACAGGGTGTACTTATGACGGTCACTAG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:1e80c520d86b
|
40 | — | — | — |
|
CACGCCGTTCATTCTTTCGGACTTATCCGCATCGTTACAA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:a4a33db207a1
|
40 | — | — | — |
|
CCCAGGCGAATGATGCTGCCGCTGACGTCATCCTGCAGCG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:d354c23e76c9
|
40 | — | — | — |
|
CTGTAAGCTGTCGGGACCGATAAAAGTAATGTAATGATGA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:693971a8c353
|
40 | — | — | — |
|
GCAAGACATACCCAGTCTTCCCACCTCCCTCCGGTCTCTG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:34dc8c37eed8
|
40 | — | — | — |
|
CGGCGCACCCCAGGGCTGTTAGCTACGCTCCAGCTACTGC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:6a0ffb9f0240
|
40 | — | — | — |
|
CTTAATTACCCTGTCGTTACGTGTAACGTCATGCATATGA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:08a1c355c9dd
|
40 | — | — | — |
|
CTTTTACCCAGGTATTAAGGATAATTCACAAACAACATAA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:919ffebb52b2
|
40 | — | — | — |
|
CTCGCGTTGCCATGCCTTTGTCCCCCTGGCGTCGACCCTG
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:5f5c33caaa4c
|
40 | — | — | — |
|
GTTCAACGACGCGCTTGCAGCGTGTTCAACTGACGTCATA
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:f7c32187daa5
|
40 | — | — | — |
|
CCTACTCCCTTTCCGTGACGTCATTTACATACAACTCCAC
PANAPTA:P18848:ATF4_HOXC10:PRJEB66722:R3:65a865cba32b
|
40 | — | — | — |
SELEX rounds
R3 ·final