ATF7_PTF1A
CAP-SELEX sample PTF1A_ATF7 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AGTATCAGGTGCGCGCAGCCGCAAGGCTACACACAACTGA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:97c5757cc0c8
|
40 | — | — | — |
|
CTTTCACCTAGAGACTACCATAACAAACGATGCATCCATG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:d7c9a2ae4aa8
|
40 | — | — | — |
|
GACATGTCCCTCCCCTGCCGCCCCCAACCCGCGCCCAAGC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:54fcd08369a7
|
40 | — | — | — |
|
AACCGGCACACAACAAACTGTAACAATTTGCCAAAAAAAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:8d0f7ca5b9e8
|
40 | — | — | — |
|
AGATGACGTCACATTTCAGACGGAGCTGCGCGTCATCTGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:e04d57658be8
|
40 | — | — | — |
|
CGTCAGCTGCCCTCTGACCAACTGCACCAGCTGACGTCAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2cd1a607c420
|
40 | — | — | — |
|
CCGCCGTCCCACCCTCTTCCTCCCCCGCCACCGCCACAAA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:6fcfe79552f0
|
40 | — | — | — |
|
ACCGCCATCCCCCCCTGCCGTAACCTCATACTCCCTCGCC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:a31598b85701
|
40 | — | — | — |
|
CCGCCCGCGTCAACCAGCTGTTCCGAGGCGAACAGCTGTG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:145607cd31c4
|
40 | — | — | — |
|
GACAGGTGACGCCACTACGTCACCTGAAGCATGGGCGTAC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:6be64bf82f91
|
40 | — | — | — |
|
GCAACTACATATCACGCTGGTGACGTTACGTCATCACAAA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:fd913563babf
|
40 | — | — | — |
|
GCATGCCTCATCCGCTGACTCGTGCTAGGGACCACGCCGC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:01eb1fc29773
|
40 | — | — | — |
|
TGGCCGATCGCATCACAACTGTGCACGTGACGCTAAGCGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:d461b19f4e19
|
40 | — | — | — |
|
CACAGATGGTCTTACGTCAGTATTCACATCTGTCCGGGCA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:28ec119a38d2
|
40 | — | — | — |
|
GACACACTCGGAGTGATGCCCAGTACTCGGTCCACCTCTA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:1968df4a7d46
|
40 | — | — | — |
|
TCCACCACCCTCCACCCCACCCCACGCCAAAGAATGTCTT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2927d9cc20c9
|
40 | — | — | — |
|
GTACACCTCGCCGTTCCCACATGCCACCGTGCACGCGTAG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:9dd79847e098
|
40 | — | — | — |
|
CTCCATACACCACGTGACGTCATCGCTGACGTGGCTAAAC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:1b932d601c04
|
40 | — | — | — |
|
CATCATCCAGCTGCTCCAGCCACTGAGGTCGTGCAGCTGG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:0d50361faa75
|
40 | — | — | — |
|
GCCGCCAACCCTAGCCACCCCCACCCGTACCCCCCATCGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:39cf6d3794b2
|
40 | — | — | — |
|
TGGCAGAAGCGTGACCCACCCGACCGTCCCACCCCACCCG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:8706d200a37e
|
40 | — | — | — |
|
AATAAGCCCGCGAGCTCCCACCAGCCCGCCTCTACAATGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:df0690b6ba7a
|
40 | — | — | — |
|
TCCGTCATTGTCTATCAACCTGTGCCCAATTCTGCGTTAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:3518a3b036af
|
40 | — | — | — |
|
ACAGCAGGTGGTCCCGCCACTCCCGCCCGCCCTCACCAGG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:45ceef28cb70
|
40 | — | — | — |
|
GCCGCACCGCACACGGCGCCACCCACGGTACACGCGCGAC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:db337cfaf224
|
40 | — | — | — |
|
CCGCCCCCGCGCGGACCCTCACGGCGTTACCCCCGCTGCT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:ba598e89df50
|
40 | — | — | — |
|
TTGCGACTCCGGCATTCAAGCCCTTACGCCGGCAGCATTG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:1749ec78514c
|
40 | — | — | — |
|
ACCACCCCACGTCGTCCCAGTGCTCCCCTTTACCCTACCA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:93b2aa7b28f1
|
40 | — | — | — |
|
CCCACTCACGCAATTGTGCTATACCGCGACCGATCTTACG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2edc39f52b66
|
40 | — | — | — |
|
CGCCACGTCCCAATTACAGACCAGTAGTGATGTAATCGTG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:f3a047dae91e
|
40 | — | — | — |
|
CCGGTTAGCTAGTCTTCCGCACCACGGCGCGCGTCACCTA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:e7af43d51d72
|
40 | — | — | — |
|
TGTAGGCCCTCGTGCCTACCCCGGCCCACCTGCCCTCCAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:7776f320010b
|
40 | — | — | — |
|
CTCAGTTCCGCGTCCCGGCTCAATACTTGCGCTATACGAA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:9fda4d9be395
|
40 | — | — | — |
|
CGTGGACCTTCAAGCACTCCTCCGAGACCCGACGTGCATG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:59ecd139c921
|
40 | — | — | — |
|
ACGAACGATGAACAGGCAGCTCGGTATTCGTAGCTACCAC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:9c7a31126d49
|
40 | — | — | — |
|
CTCATCACACGCACGTGACGTGATGTTTTCTCATCATTCC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:0d625d837e39
|
40 | — | — | — |
|
TACGTCCACTAACCGGCGCGACTCACGCATGCTGCAGCCC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:a618e3d50bf4
|
40 | — | — | — |
|
TCAGACAGTGACGTGCTGTCGTTGCAGAACTACGTTACGG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2767779731e6
|
40 | — | — | — |
|
CTACCCATGACGTCACGGGACCGTCACCGAGCCCTCTCCC
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:e3afa43073b4
|
40 | — | — | — |
|
CCGCCTCCGAACATCCAGGCCGTACACCTTTCCAGCGCGA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:4fbf8259a1b2
|
40 | — | — | — |
|
CCGCTGTGAGTGCAGCTGGAACATCTTGTTATGCGTTCAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:5893facfc0b7
|
40 | — | — | — |
|
ACCCGTCCACCATCCCACATACAATCTTGCTCCCTAGGCA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2ac5cbe64858
|
40 | — | — | — |
|
TCTGAATGACATGCACTGCTGCAGGTAAGCCGTGCATATG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:598181ff0b02
|
40 | — | — | — |
|
GCTACCCTCTCACCGAAGCACATGACGTCACTCACAAACG
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:5ec9c87dd327
|
40 | — | — | — |
|
ACGCGATGCCGTCAGCACGTACAAAAGGAACGCATGACGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:1344124d8eb6
|
40 | — | — | — |
|
TATCGCCTCACGCCTGGTGCAAATGACGTCACTGTCCAAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:448cc4d96847
|
40 | — | — | — |
|
CCCTACTCCCCGTAGGACAAGCCGCACCCCTGGTTGCTAA
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:eaedf908a788
|
40 | — | — | — |
|
TTGCAATCGACCTACTACCTTTCGCCTGACAACGAAACGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:2b13dddd1ac2
|
40 | — | — | — |
|
CGCGTAGGGTAATAAACACGCGTATGTAACATACGAACGT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:c794233debf4
|
40 | — | — | — |
|
AACCCACCGCCTTCCCCCCCCCTCCCGGTACCCACACTAT
PANAPTA:P17544:ATF7_PTF1A:PRJEB66722:R3:83a4634848a8
|
40 | — | — | — |
SELEX rounds
R3 ·final