ATOH1_FOXA1
CAP-SELEX sample ATOH1_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ATGTGGTGCCGCCCGTAAGTGCACATCCGGGCGCCGCGCT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:cf83456ed339
|
40 | — | — | — |
|
CGTAGCAGGACCGTAAGTGCGTACTGCCGGTCCCACCTAG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:e2b079190a1a
|
40 | — | — | — |
|
ACACGTTTATACCGTAAGTCAAGACTTCCGGTAAAAAGGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:fe6082d2e47b
|
40 | — | — | — |
|
GTCAAACCGTAAGCACCAGCTGCCGGTTCCGACCACACAC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ee7f29f4777a
|
40 | — | — | — |
|
GTGCATCCATTCATACACTCATAGGCTAGAGTGCATAAAT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:1f6efd467639
|
40 | — | — | — |
|
AAACCGGATGCCCGCTTCCGGTTACCTACAGATAAGCGCG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:017c6bce9fb4
|
40 | — | — | — |
|
GAAGACCAGTACATATACATATGGCTATGATACATATCCT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:2ffa0d4761d4
|
40 | — | — | — |
|
ATCATGACTCGCTACATACTTCAGGGATGATGCATATAGC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:21c25c62a99f
|
40 | — | — | — |
|
TCGGAACGTAAGTGAGCGCAAGGATCACATCCGCTCGAAT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:7388329dc48c
|
40 | — | — | — |
|
CAACACACCGTAAGACACGATCTGCCGGTGTGGGAAGTGG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:487704767afe
|
40 | — | — | — |
|
TACCTGTATCATGCATAACACGCTATTGGTAAGGTGACTT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:2b48ce3d4e5a
|
40 | — | — | — |
|
ATGCAGCGACGCCAACATATGGCTTATGTAAACAATGGAC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ca7be65db9fe
|
40 | — | — | — |
|
CGAGGAATCACAGCCATATGGCAACGGAACAGGCCATATG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:3328a92bb298
|
40 | — | — | — |
|
CCTGAGTTCTAATCACCCACACACTCACTCGATCACAACT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:a3cf0db2cdc6
|
40 | — | — | — |
|
TTCGACGCGTAAACTAACGCTTCCGGTCCAAGCACGAGTA
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:bd4be65b6baf
|
40 | — | — | — |
|
TACAGCTGTCCACACTCCCGTTGCCGTTTCGCGACAGCTG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ec8c263a73be
|
40 | — | — | — |
|
ACCACATGTATTTGTTTACTTAGCACCGAACATATGGTCA
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:fe0740dd096e
|
40 | — | — | — |
|
AAAGACCGGAAGTGCGTACTTCCGGTCCGTGGCATCCAAA
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:a89ca84dc3fa
|
40 | — | — | — |
|
ACCGTGACATACCGGATATCCGCCATTGCCCGTCTTCTCC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:872ab41b3955
|
40 | — | — | — |
|
TCAGAATCAACACCAACATATGGTCACTAAGTAAACAGAT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:d7fc282f4e47
|
40 | — | — | — |
|
GGCTATGCAAATACGAGCATATGCCATGACAAACACGGTG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:f3949e9973de
|
40 | — | — | — |
|
TCAACCGGAAACCGCCCAACACCATGTGCTTCCGGCGCTC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:33199185adf6
|
40 | — | — | — |
|
CATGACATTTAACAAAGTAAACACTGACAGCTGTTAGCGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:c3c7e06a2014
|
40 | — | — | — |
|
CACGTCGGGCAAGTGGTTATGTAAACAATCACCATATGGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ed3bc76ec2de
|
40 | — | — | — |
|
GATAAGCAAACAAACAACAGATGTTCACACAGATGTAATC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:b997be0e2c57
|
40 | — | — | — |
|
CAACTGGTTTACGGTACATATGCATTTGACATGTCATATG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:4562c008d247
|
40 | — | — | — |
|
TGGCCGCAAACAGCTGTTACGCAAACACACAGCTGTGCAA
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:175182cf8f3c
|
40 | — | — | — |
|
TCGATGATATTTACACAGCGTACGCTTACCATATGTTCTC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:168710c9a348
|
40 | — | — | — |
|
AGCGAAACAGCTGTTGGACGAACGACACCGCACCAGCTGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:0045e283198c
|
40 | — | — | — |
|
ACCTAACATATGGCATGGTGTGTAAACAAGTCCGGAGCAT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:e21aefb5ebed
|
40 | — | — | — |
|
TAAGCTCGAGCATACCGACTATGTAAACACAGCTGTTCCT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:2310727020ac
|
40 | — | — | — |
|
ATGTGGTGCCGACCGTAAGTGCACATCCGGGCGCCGCGCT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:5e9b111418ad
|
40 | — | — | — |
|
TTTTGCAATAACTCGGTCCCCTCCTCTTGTGAACGTACGC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:c2a255ecb654
|
40 | — | — | — |
|
TTGCGCAAACACAGCACGGTATTGACATATGGTCTTTGGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:50bdd9938289
|
40 | — | — | — |
|
GCCGCGCAGTAAGTGCTGTTCGCACTGTCCGGCGCGCTGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ddfc06e12112
|
40 | — | — | — |
|
TTGTGGACTCGTACACTAAGTAAACAAAGTGGCATCTGTT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:f5c77ee24461
|
40 | — | — | — |
|
CGGAAACGGAAGTCTGCACTTACATTTACGTGCGCAACTT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:e857de50046a
|
40 | — | — | — |
|
ACCGGAAGTCACACTTCCGGTACCCCCCAGCCCCAGGACA
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:a57d58c972f2
|
40 | — | — | — |
|
CGCGCAGGCATGTTTACACAAGACCATCTGTTTATCCAGC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:4042718efc1e
|
40 | — | — | — |
|
AAAATATGTATCTTCTGACATATGCTACTGTTTACTTGGC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:eebbd76d53fd
|
40 | — | — | — |
|
AAATATTGACTTAGTCGCTAGCTCGCAACATATGTCGTCC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:83381ba29969
|
40 | — | — | — |
|
GCATATGGCTTTGTTTACACAGCGACGGCACCACCGTTGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:1a2cf61a1809
|
40 | — | — | — |
|
CACACCGTAGCGTACGCCGGGGAGTCTACCCTTTTACGGG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:d86dc43b5439
|
40 | — | — | — |
|
TGCACGACTCCATATGCCACATGATGTATCATATGTTGGG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:a56b7e2637bb
|
40 | — | — | — |
|
CCACTATTGTCCTTGCCATATGTCGTGTTGTTTACATTCC
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:8c2e35e9ed37
|
40 | — | — | — |
|
ATTGTCAACGAGCACTAGCAGAGTAAACAACAGCTGCCAG
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:97fb618fa307
|
40 | — | — | — |
|
GACGTACACTAATGCAAATATTGACATCTGGTATTGCAGT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:d23b1eb2fc09
|
40 | — | — | — |
|
TCTAAAAAGCACCACACCTCGAACCTCCCATACACTCACT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:4e105c1e62e1
|
40 | — | — | — |
|
GCCAATGTAAACAACATCTGGCACCGTGTTCGTGCATGAT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:ca94115dfd76
|
40 | — | — | — |
|
TCCAGTGTCTATTTACTTTACCGAATAACAGCTGTGCCCT
PANAPTA:Q92858:ATOH1_FOXA1:PRJEB66722:R3:a8a20775f0f6
|
40 | — | — | — |
SELEX rounds
R3 ·final