ATOH1_FOXD2
CAP-SELEX sample ATOH1_FOXD2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCTTTGCAAGAACACTTAATCCACCCACTAATACCCAATT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:fb23731a3935
|
40 | — | — | — |
|
TGTTATTGTAAGGCCATATGTTCAACACTAGATACGTGTC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:cb6b728a5424
|
40 | — | — | — |
|
TTTATTTAGCGACATCTGTTGTTTGTTTAACTATAGGGAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:b55c5cc8e30c
|
40 | — | — | — |
|
TGACAGCTGTGGCCTTAAATAAACAGTGTACACGACAAGC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:d6636bd2276e
|
40 | — | — | — |
|
CAGAACGTCAACACGCTAAACAAACATTTATTTAGGCAGT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:0e8ddc9aec08
|
40 | — | — | — |
|
TGACGCATTTCCGTCGAAACAATAATATTTGTTTAGGGTA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:a7b86771ea57
|
40 | — | — | — |
|
TGCCAACACCATATGTTATTGTGATCTGCAATAACAATAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:90f5c5ff24ea
|
40 | — | — | — |
|
TTTGCCTTACAGTTTACGTAAACAACATATGTCGTGGTCT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:738f67e274e8
|
40 | — | — | — |
|
GAACAACAGCTGCTCACTACAATAACATTGAGTGCCTGCA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:203c5fe45e7f
|
40 | — | — | — |
|
CAAATGATCATAATGGTCCATATGTCGTTAAGTCAACAAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:48408af3a9ab
|
40 | — | — | — |
|
TGCGTACGTCAACAATAATATTATTGTTTTGCCTTATCGC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:30ee13a2da34
|
40 | — | — | — |
|
CTTGGTATGTTTACTTAAGAATGGCCATATGTCATCAGGT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:85f08c1c09b9
|
40 | — | — | — |
|
GCAAACAATAATATTATCGTTTCGCGTCATACGTAAGAGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:251eadd0294e
|
40 | — | — | — |
|
GTGTTTACGTTTCGCATGACAGCTGTTTGTTTAGGGTTAT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:44ee4eeef735
|
40 | — | — | — |
|
TCCGCCTGTTTCAGCATGCTAAAATAATGTTATTGTAGCA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:1b626ee62e04
|
40 | — | — | — |
|
TTTACATAAGACAAACAGCATATGGTGTAATGTTTTGCTT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:ef05b368bec0
|
40 | — | — | — |
|
TTTGTACAAGGCACAACATATGCTTACGGATAACATGGCC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:c0e3dc256480
|
40 | — | — | — |
|
TATTTGCGTGTAACAATGTTATTGTTTGTAACATATGCCG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:8aebe55ab05e
|
40 | — | — | — |
|
TACCGGCGATCGTTAAGTCAACATTATTGTAACGGTTGAG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:013a7550db42
|
40 | — | — | — |
|
TTATGTGTAATGTTATTGTACGTGATGACATATGTTATGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:35de76e0884b
|
40 | — | — | — |
|
CTACCTGCCCAAAGTAAATATTTGCTTAAGACCTCGACGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:edc56256f60d
|
40 | — | — | — |
|
CATTTGGCAGTGGCAAACAATAATATTATCCTAGTCACAG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:9c29be0aec81
|
40 | — | — | — |
|
GATTGTTTACATAGTGACGCATACCACATGTCATTGTTTA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:25a199554278
|
40 | — | — | — |
|
AGTGTTTATGCGACTACCTTATGATAATATTTACATAGCG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:efe72bdf462a
|
40 | — | — | — |
|
TCCACACAAACCATATGGTGCAACAATAACATTAGAGCCC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:bfeb9738bd22
|
40 | — | — | — |
|
TAAACTACATGACATATGGTACATGTTGACATAGCATCAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:7a81f1e2f002
|
40 | — | — | — |
|
GTCGGTGGGGGCAATGCGTGTGCAGCGTTAATAGAGCGTG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:b67825b912e2
|
40 | — | — | — |
|
ACAACGTACCAATGTTAGAATAACAATAACACATGTCACT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:1f8ad369b68f
|
40 | — | — | — |
|
ACGTCGCAGCACAGCTGGTGTTAAATAAATAAGCAAACAC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:b0b95e833ab1
|
40 | — | — | — |
|
CAACGCAATTATGATAGCATCTGTTCATTGTTTACCTAAT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:2498b542d50f
|
40 | — | — | — |
|
GTTTCCGCTTATGATAATATTTGTTTAACCAAGCCTGTTG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:729ceb138689
|
40 | — | — | — |
|
CCGTGACACAACATATGGTCGACTTAAGTAAACATTAAGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:6a6428020b74
|
40 | — | — | — |
|
TTGACCTAGCATGGTCAAAAGGCATATGGCGTAAGATAAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:2408aff55ecb
|
40 | — | — | — |
|
ATGTTTGTTTAACGTGACAGCTGTTAAAATCTATCTACCA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:644006b173ec
|
40 | — | — | — |
|
TGTTGTTGTTATTGTTGTAACTGTGACATATGTTGGCCTA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:091f8a9fc150
|
40 | — | — | — |
|
AAAACGGATTGTTATTGTTGTGATGAACATATGGCATGTA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:264d3ce80c89
|
40 | — | — | — |
|
TTGTTTTTTCGGAACGATGCCATATGTTGATTGTGATTGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:481b2b17ed6d
|
40 | — | — | — |
|
ATGTGAAACACGCGCTGTTACGTAAACAAATAACATATGC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:226a066a5502
|
40 | — | — | — |
|
AACCAACAGCTGTTGTTTACCTTAGCGTGCACGCGTACAC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:e7fe221b9ae6
|
40 | — | — | — |
|
ACAATCGACAACATATGGCTCTAAAACAACATAATGCTGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:157d0c15dbac
|
40 | — | — | — |
|
CTAAGATAATATTATGTTTGCCGACCAACGCCCTTGCTGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:add4802be75e
|
40 | — | — | — |
|
CGTACACCATATGCTCACAATTACGAATACTAAACAAACA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:f18b600848db
|
40 | — | — | — |
|
CCGATGCCTGTACTAATATTATCTTAGCGTCGTGACTAGA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:2763d5a2b99c
|
40 | — | — | — |
|
CTTTAGCGGAAAGATAATATTATTACAACGCATGACAACA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:9d3aae493a83
|
40 | — | — | — |
|
CATGCCCTCACGCCTACAACAACATCTGCTGCTATGTAAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:5bfd6fcfd940
|
40 | — | — | — |
|
AACAGCTGTCGTTACATGCCTTACGTAAACACGCCAATAG
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:dff5a63453d1
|
40 | — | — | — |
|
TCGGCGGGGATGTTTACTTAGCGACATATGCTTAATACGT
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:5165aa5604d0
|
40 | — | — | — |
|
GAAATCGTTAAAATAATGTTAGTTCAAGTACATCTGGTGC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:9630b8f4cd5e
|
40 | — | — | — |
|
GCTAACAACATATGGTTAAAGTTTACATTAGCTGTTCTAC
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:073620ca922f
|
40 | — | — | — |
|
TTAGTTTGAGAACATATGTTTATTTTGTCTGTTTACATAA
PANAPTA:Q92858:ATOH1_FOXD2:PRJEB66722:R3:8041883d29b2
|
40 | — | — | — |
SELEX rounds
R3 ·final