CLOCK_FOXA1
CAP-SELEX sample CLOCK_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CAGCGTACATACACAAATGACAAACATTGTGTGCATATAC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:d88de0ec4cf9
|
40 | — | — | — |
|
GGAATCAGACATATACACGTCATCCGAATACATATTGATT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:40c4e93923e6
|
40 | — | — | — |
|
GGCGCGCATGTTATCAACCGAGTGCGCACCGAGGTGTGGA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:d18a4f895988
|
40 | — | — | — |
|
GTGAGAGTACGCGTGGTACGACGTGAAAACCACCTTATTC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:47f4e0014e5d
|
40 | — | — | — |
|
TACAACGATACAGCGAGAAGACACCTTAACAGTTCGATCA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:48a88870dc1d
|
40 | — | — | — |
|
ACTAGGCGTGAACCCAATGGCGACAACAACGTTACTCCAA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:c3c9864c6c91
|
40 | — | — | — |
|
GAACAAAGTACATACAGTAAGAACTGCATATGCTTTTTGT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:8951ca2fb496
|
40 | — | — | — |
|
GTGGCGGTGGCGCATATGAATTAAGGGAAATTGACATACG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:7a53314d8966
|
40 | — | — | — |
|
CGGAATACACCCACACCCACACTTGGAACTCAGCGACCAA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:a5f2f1bce907
|
40 | — | — | — |
|
ACGATGCTGAACTCCCGCGCCTCGGGCACCACTTGGTTAG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:e72e672ba52d
|
40 | — | — | — |
|
CGACACCCCCAGCTAGGCCAGTAGTAAAGACACCTCCCTT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:51b5726d2361
|
40 | — | — | — |
|
AGACTTACTTGTGCATAGCGACAACTCGCCATACACAAGA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:1c7e2abcf221
|
40 | — | — | — |
|
AACCGCGCCGATGTGCATATACCAATTGCTACATACACAC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:2c7b0f1228e4
|
40 | — | — | — |
|
AAGATAACATTACATACCACAAATGTGTGGCATATAACAG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:e53afd821b8d
|
40 | — | — | — |
|
CCATGTCCTAGCACATCAATCATTACCGATTAAATGCAAC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:321966481d2b
|
40 | — | — | — |
|
CCAACCGTAGCAGACATAAACCAGTTGGTTCATATTGCTT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:d0e10ecda0a2
|
40 | — | — | — |
|
GCCCTGGCCGATTCATACAAACTACTTGCATAAATCGGAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:89c2e125db75
|
40 | — | — | — |
|
AAACTGCTAACACGACATATAATACATTACATATGGTGGA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:ebe69b03cf20
|
40 | — | — | — |
|
CCACACATTCGTACATACACTCAGTTTACGCGTGCATATA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:2a1c6ea8438b
|
40 | — | — | — |
|
GCTCTTCATATAATACGTCGTGTCGTATGTACATAAAGCG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:e72fad98df31
|
40 | — | — | — |
|
ACGGTACGTACATATCATAACAATAAGACATATACATACT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:ca51d256b042
|
40 | — | — | — |
|
AAGCTCTGGTGACATATGGTGACGTGTACACAACATATAA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:a05ee7bf593f
|
40 | — | — | — |
|
TCATACACAAATTGAGTTTGTGCATAAACGATGTGACATT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:5345cff89e8a
|
40 | — | — | — |
|
GCCGATCCACTGTTACACGTCCCCGTTCGCTCGTATTACA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:17c6a01623cc
|
40 | — | — | — |
|
GTTTGACGAACCTGCATTCATCCCGCGATCACGCCAGCTG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:eefdef31ce09
|
40 | — | — | — |
|
GCGAACTACCAAGCATGAAACTCCTGCGATCACGCGCGTC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:4773139a32ef
|
40 | — | — | — |
|
GCGCACACCTCCCCTTGTTCGTGCAACCCCTGGCCATGTC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:91777745c4d4
|
40 | — | — | — |
|
CATACATATAACCGTGCCAATATCACGGTTACATATACAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:10b7126b3f41
|
40 | — | — | — |
|
AAACTAGATGTTCATACACCGCGCTGCGTGTGCATATACA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:9d6514ce5449
|
40 | — | — | — |
|
GTTCAGTCACACACATGTGTCAACAACATCGTACACGTGT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:b7000b47bd22
|
40 | — | — | — |
|
ATATCGTCTACCGCCGCGTAACTACGCCCCGACGCACGAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:d72a7b6cd503
|
40 | — | — | — |
|
TGACGTACGACATAAACCAGGTTAACTAGTTCATACGTAA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:77140f4ea8cd
|
40 | — | — | — |
|
CAGGTAATCCCACCCTACCTCACTGCCTCGGCCACCCGCC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:128763c8bf8d
|
40 | — | — | — |
|
GATGACATACAGGCCTAACCTGCATATAATGAAGAGTTCT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:654ff9aecc8d
|
40 | — | — | — |
|
GACGCAACATACACAATGAACAATCGTGCCATATAGCAGG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:c2fa0723feb6
|
40 | — | — | — |
|
CTGAATGCGGTACATATACAACGAGACCATGGTACATATG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:f25943d33e33
|
40 | — | — | — |
|
AGTACATACAATCTACAAGGTTGCATATACTGGATTCCGA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:1ee33a979358
|
40 | — | — | — |
|
CTTGCCTGTTTACACTACACGTGGACGCACGTGTACCATT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:657dd00827b1
|
40 | — | — | — |
|
CACAGTTGCATAAAGAAAATTAATGCTGTTCTTCATACAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:740a25825898
|
40 | — | — | — |
|
GGATATTACATACAGCGAGTTATGAGCGCAGCATATAAGT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:87ea9be268ec
|
40 | — | — | — |
|
GACTCACACACACCTTCATAGCTCATCCGAGAATTATGCA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:00d6f7a6eec6
|
40 | — | — | — |
|
CGAGCTCCTCTAACGCAACTTTAAATTCCTCACCCGGGCG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:12f0364b01de
|
40 | — | — | — |
|
GTGCAAACAATAAAGCTGACATGTGCGTTTGTTTACACAA
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:2a1daccdca74
|
40 | — | — | — |
|
GTTCATACACAAACATTCGTGCATAAACAAACACGCATAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:0651217f03de
|
40 | — | — | — |
|
ATGTAAATAATAACACGTGGCGTGACCTACAATGCACACG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:5ca3c5dee112
|
40 | — | — | — |
|
CAGTGCTACATATAGCATTGACATCTAACGCTACATATAT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:7b08c6c7c945
|
40 | — | — | — |
|
TCTCCCCTACATACGCACAGTACGCATGCGCATATAGAGC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:374545eb7bbb
|
40 | — | — | — |
|
GCTATCCAATTGACATATACCTGAGTACATATAAATGAGT
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:38471680e1e7
|
40 | — | — | — |
|
ACCCATCGTACATACACAGCCCATGTGCATATACCAAGCG
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:354973868731
|
40 | — | — | — |
|
GTATACATAAACATACGTGTTCAGATCGTTCATATATATC
PANAPTA:O15516:CLOCK_FOXA1:PRJEB66722:R3:dfcfbc011e8f
|
40 | — | — | — |
SELEX rounds
R3 ·final