CLOCK_HOXA2
CAP-SELEX sample CLOCK_HOXA2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCTAATTGCGTAATTATGCGCACGTGTGTGACATGCGAGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:d75e6a8ef261
|
40 | — | — | — |
|
CACGTGGGAGGCACATGGGCGTAATGACCATCCTAATTGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:a68a8e036787
|
40 | — | — | — |
|
CACGTGCGCATGCCACGTGACTAATTAACTGATTAAGTAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:3d51a6dea724
|
40 | — | — | — |
|
ATACTATTAATTTGAATGTGATGACAATTAACGATGCATG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:4c3922467cac
|
40 | — | — | — |
|
CGAACATTACACGTGTACGATCATTAGCAACACTAATGAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:fb7888139c06
|
40 | — | — | — |
|
TGGCTCATTAGCGTTACTCCCACGTGCCTGCCACGCGCCG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:a52e014941cd
|
40 | — | — | — |
|
CACGTGCTAATTACACGAAGGCACATGACACGCCTAATGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:cbf6d2865367
|
40 | — | — | — |
|
GCATGGCCCGCCACGTGTGACCATTATGGCACCCTAATTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:46fc275d577a
|
40 | — | — | — |
|
CATCATTACCATGGTTCAGACATCATTAACATGACACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:118b85b0b6a9
|
40 | — | — | — |
|
TGGATCGTCATCAACAGAGTTAATTGCTTTATACACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:c2ccb71fc19d
|
40 | — | — | — |
|
TTAGGGTAATTACCACGTGTTGACCGCGTGTCCTACTTCT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:33790934a770
|
40 | — | — | — |
|
ACACGTGTCGTAAGCGTACTAATTACCCGTAATTATTACG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:9448decc591d
|
40 | — | — | — |
|
AACTTAACACGTGTAATGCCACGTTAAACAGTCATTATGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:46b9a2b3b618
|
40 | — | — | — |
|
TTCATTACGCGATAATTACGCAGTAATTAACATAACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:b425b725954c
|
40 | — | — | — |
|
TGAGATGACAGTAATTTGACGTAATTAGAGCGACACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:a20f4c4e5dd9
|
40 | — | — | — |
|
TGTTATCGACACTAATTACGCATAATATCAGAGACACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:5f4c3bb0697c
|
40 | — | — | — |
|
CACTGAGGCAATTAGCGGTCAATAATTATACAACACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:1db780c24c8c
|
40 | — | — | — |
|
ACGAGTAATTAATAGCTGTACACGTGATGCCACGTGGCAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:3e22c12c6908
|
40 | — | — | — |
|
GCCAATTAGGGAGAGCAACGTGCTAATCACGTGCTGGCGA
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:cc08f8b5ad4b
|
40 | — | — | — |
|
AGGGCAATTAAGGGTAATAGACCACGTGTCAGCCACGTAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:2ec783c1b516
|
40 | — | — | — |
|
GGACAAAAAACGCATTAAGACCATAATTAGGAACACGTGG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:76cff6f0ec36
|
40 | — | — | — |
|
AGCCATTAACGAGGCTAATGGCCACGTGAAACGCACGCGG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:d1a0612a4d57
|
40 | — | — | — |
|
CACGTTGACATCCACGTGGCTATTAATTACACTTGATTGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:1461c98d5cca
|
40 | — | — | — |
|
AATGTGTCGCTAATCGACGCCTCGTGTAATCAGACACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:d1cd3803417b
|
40 | — | — | — |
|
TCATTAGCATTCGCTAATACACGTGCGTTGTCACGTGGCA
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:0844d821cacc
|
40 | — | — | — |
|
AAATGTAATTACCAAACACGTGTCAAGCACGATGCATTAT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:bedf654777f4
|
40 | — | — | — |
|
TGGCTCATAATTGGTAATTATGCCTCCGGTGTGCACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:1ea797d98a0f
|
40 | — | — | — |
|
CTACTCATTACTGACACACTCCAAACACGTGACTAATTAG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:291a11e03f0c
|
40 | — | — | — |
|
TTAAGAATAGTAATTAAGACCAATGACGAGGTACACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:7c3a946549f2
|
40 | — | — | — |
|
CGTGTACCCGTGCCATTATCGTTCCTAATTATGCCACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:7d20fc14f546
|
40 | — | — | — |
|
AAAGCACGTGGTCGTACACGTTGCTTCTGCAGCTAATGAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:c171eb5a09fd
|
40 | — | — | — |
|
GGCACGTGTTACCGCAAATTAGCATGTGACTAATATCGCG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:45bc201b11eb
|
40 | — | — | — |
|
CTGCGGTAAATACATGTTTAATGACTCATTAACACGTGTC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:979ff4f7fb27
|
40 | — | — | — |
|
CACGTGCATACATGCACCCTAATGGTTAATTAGCATGCAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:c7c493c664bf
|
40 | — | — | — |
|
AACACGTGTTCCCATAATTAACGTGCATTCCATTTAATGA
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:ebc786254fa6
|
40 | — | — | — |
|
CGACCTGGTAATTAGGAAGTCATTAGGGGCCTGCACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:c7bf57067671
|
40 | — | — | — |
|
CGTTAATTATGCTACACAGCGTCCCATTAGTAGCCACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:949f804eea55
|
40 | — | — | — |
|
CACGTGCCGTGCACGCGCATCAATTACCTACGTAATGGGA
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:bf32fc593679
|
40 | — | — | — |
|
AAATCGTTAACACGTGGTATTTAGCCTAATGGCCACGTGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:2938b07f79b6
|
40 | — | — | — |
|
ACGCATTTTAGGATCATTAGGACACGTGGACAAACGTAGC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:b3aeea173825
|
40 | — | — | — |
|
CGTTAATTCGATTTTAATGGCCAGTGATTAACGTAATTAC
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:e482d2b8bdaa
|
40 | — | — | — |
|
TTACCATCATTAGCACGTGGACGACCACGTGGAGACGACG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:0c02f60fe5a0
|
40 | — | — | — |
|
ACACGCGGCCAACACGTGAGTGTATGCTAATTACATCCAA
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:c5d3cdf32d82
|
40 | — | — | — |
|
ATTAACGTAACATGAGGCTTGATTATGATGTCACGTGTAT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:7c3a77629547
|
40 | — | — | — |
|
CACGTGGGCCATCCACATGTCATTTATGTCGAATCATCAT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:80bd6f7bfeea
|
40 | — | — | — |
|
TGGCATCATTATCTACAATAATTATCTCGGAGTACACGTG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:30008a7ece23
|
40 | — | — | — |
|
GTTGCTCGACACGTTGCCTTAACGTGTAATTAATTACCCG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:2ebdf6e3b0f4
|
40 | — | — | — |
|
TGACTCAATGGTATTGGACTAATGACGTAATGACACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:79179ad5c66b
|
40 | — | — | — |
|
GGATCAAATTAACTTCCAATTACATCGTATGTGCACGTGG
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:edcb481b3c94
|
40 | — | — | — |
|
TACGTGCGTGACAATGTGCATATTAATTAGACGCACGTGT
PANAPTA:O15516:CLOCK_HOXA2:PRJEB66722:R3:abde9eb97460
|
40 | — | — | — |
SELEX rounds
R3 ·final