CREB1_FOXA1
CAP-SELEX sample CREB1_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCAGTCCGAGTTGTGCGTGACGAGCCCGAAGGCGTTAATG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:fac0098c69fe
|
40 | — | — | — |
|
ATCTAAAATTGCAAGCTGTCTGAGCCGCCGCTCAGCACGT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:9353e5e16d75
|
40 | — | — | — |
|
TCGATGTGTGTTCAATATATGAGGTATGTCGTAAACTGTT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:4101d7365c47
|
40 | — | — | — |
|
TAAGCCCCGCTCCCTCCCAAACGCCGCGTGTAAACACAAG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:144ed7227e56
|
40 | — | — | — |
|
CTACGACACAATTTTCGCTAATTAAGAGCAAGCCCAACGG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:504b9df12441
|
40 | — | — | — |
|
AACCACGCGATTAAGCCTACTCCACGTGAGGATTCCTATC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:f87599cf7d1e
|
40 | — | — | — |
|
GATAATAACAGCTCAACATAGTCGCCGTACTTACTTCCCT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:9f4d2fccc1c0
|
40 | — | — | — |
|
ATGTATGACGCAATTACGTTAACGATATTACGTCACCTAA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:406887430ab8
|
40 | — | — | — |
|
TTCCGCATGGGTAAACAAACGACACTTGATGAGCGAAATA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:e8b2bfd7652d
|
40 | — | — | — |
|
TGACGTAATAAGCAATCGTACGTATCTACGTCATCATCCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:3301d3e9eb30
|
40 | — | — | — |
|
TTGATCCGTGACGTAACGCCATGACTATGTAAACAAAGAG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:3fcdc4823db4
|
40 | — | — | — |
|
AATTGTACACGTCATCTCATACCTGTATATGACGTGTCCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:e44ca698d769
|
40 | — | — | — |
|
TCGGAATTGTTTACATTGCGATTCTGTGACGTGACGTCAT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:74bbd5ebf839
|
40 | — | — | — |
|
CTTGTTGTGACGTCACTTTGTTGACTTAAGACTGTTATTA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:f0e3f91b10d3
|
40 | — | — | — |
|
CGAGGTGACGCAACGTGACGCGGTTCATGTCGTCACCTTC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:53d6f865017a
|
40 | — | — | — |
|
TAACGACGTCACTGGTTTCAAGTGACGTGTGTGTTATTTG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:4667f981926d
|
40 | — | — | — |
|
ACACGGTGACGTAATCAACAGCTTTCTGCTTACGTAACCT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:23a6a95f36d7
|
40 | — | — | — |
|
CCAGCAATGATGTGACGTCGCGGCCTACTCCGTGGCGTCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:181f3d432754
|
40 | — | — | — |
|
CCGTACCCTTCCTACGTCACGCGCCTCTCCTATGCTACTC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:690867ce749c
|
40 | — | — | — |
|
CTGCTGACGTAATTGATAGGTTCGGATTCCACGTCAGCAC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:1aa4ee5576f2
|
40 | — | — | — |
|
GAAGCGTTACATCATCGGCAGTCCGATGACATAACACCCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:704508ba3ef4
|
40 | — | — | — |
|
TGTGACGTCACACCAAGTCCGGTGACGCCAATGGGGAGGT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:38adc9c50a4f
|
40 | — | — | — |
|
TATTTCATCTTTGGGTTGTGTTCCATTAAGTTGTTGGATC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:c82bcd37716b
|
40 | — | — | — |
|
TACTGTGTACAGCCCATTGACGTCACTTGCTCTGTTTGTT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:8191b7b2fe18
|
40 | — | — | — |
|
GCTGGATTGATGACGCGATTGCAGGCTACACGTCACAGCT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:cdde7dbce890
|
40 | — | — | — |
|
ACCGTCGTCTATGTAAACAAACATTCCATACGTCACTTTC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:cf0043d291dc
|
40 | — | — | — |
|
TTGCAACATACGTCATTTGTTTACTTAGTAGGTAAATGGG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:f70a3d23486a
|
40 | — | — | — |
|
TGACTCCGGCTGGAATAGAGGAAGGAGTGATCATGGATTC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:bfef325f3ba8
|
40 | — | — | — |
|
TGGCCTTACGTCACAACCGTTCAGAGGTGACGCAAATGCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:7ba8e5e49e0e
|
40 | — | — | — |
|
AGTGACGTATACGCCCGCTAAGCGCCGACGCACTACGTCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:30ea1b5c0b80
|
40 | — | — | — |
|
CTGGCGACACACATCCAGATTCGTGACGTCATCGAGGTAA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:99caace718f2
|
40 | — | — | — |
|
TAATTGACGTCATCTGCCCTACTATGACGTCATGTAGCGC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:c77a31440133
|
40 | — | — | — |
|
TGTAAACAGACAATGGGAGGCGATATCTCGCTACGTCATA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:612c9064d66a
|
40 | — | — | — |
|
CTGCAACGTTTAATGATGACGTAGGCTTTGCGTCACCGTT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:afb2b3a89456
|
40 | — | — | — |
|
CCTTACGTGACGTCATTCCTTTCTTCCGAACAGCCTGAAA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:f293621acc80
|
40 | — | — | — |
|
GATGACGTCATCTCATACTTTATGACGTCAGACCAGGATG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:9c8351c9bb94
|
40 | — | — | — |
|
TGACGTCACAAATATTATGTGACGTGTCTTGCGAGCGGAA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:02c735b2b690
|
40 | — | — | — |
|
CCATCCCACACTCCCAACGTCTGACGTCATCACCTCAACA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:a599e807a135
|
40 | — | — | — |
|
CCGATCTACGTCACGCCGGAGAAGTCCACTGCGATGAGAT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:210de4a883f8
|
40 | — | — | — |
|
CTGACAATTACGTCATACTCAACCTTTTTGTTTACACAGA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:cd00ec27bda9
|
40 | — | — | — |
|
GCTTCATTACCCAATTAGTCAGGACGAACATCCTTGAAGT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:6145d05f5fc5
|
40 | — | — | — |
|
ACGTCATAAAATTTGTTGTGGCGTCAACACTATGTTACTT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:74677147c169
|
40 | — | — | — |
|
AAAAAGTCAAAGAATTGTTTATGAGCAAACCCCCTCACTC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:8d7cb86d6508
|
40 | — | — | — |
|
TGTGACGTCACTTAACAGGTTGTGGTCTCTGATGTTAGAC
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:f2e0fb344dd6
|
40 | — | — | — |
|
TCGTGACGTAACGCCACCCTCGATTGCGTCTCTCATCCCT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:9f8c2b9c02d2
|
40 | — | — | — |
|
CTGTCACTCATTGGCAAAGGTACATGTGCTTACGTCAGCA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:63a8437431aa
|
40 | — | — | — |
|
AACCAGCTGCCCCTGCTTACGTCACACAATCCGTTCGCTA
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:3d6db55dfb30
|
40 | — | — | — |
|
CGCAAGCCGCTCGTGACGTCACATCCTAGCACTCGCTGAT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:d33c9fcd8bb8
|
40 | — | — | — |
|
CTTATAAAATGGAATGTGACAGTCGCATCCATTAATACTT
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:9c3e5cb3bb00
|
40 | — | — | — |
|
GATGCTTACGTCACCGAGTGCCGCTAGTCTATTTACACAG
PANAPTA:P16220:CREB1_FOXA1:PRJEB66722:R3:2edd5cffd02d
|
40 | — | — | — |
SELEX rounds
R3 ·final