CUX1_SIX6
CAP-SELEX sample CUX1_SIX6 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AGTTAATTGACACCTAATACAACTAATTTGTAAAGGGGAG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:62168af00230
|
40 | — | — | — |
|
GCCATCCCACGGCTCAGGTAACCTCGAGGCACGCTGCGGG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:98c653003118
|
40 | — | — | — |
|
CTAATGTAATTATCCATGTAAACCTGCTAATGACTAAACC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:086b105319e2
|
40 | — | — | — |
|
ACCCCATGACTCAGACCCCGGAATCTCCGCAAAATTGAAA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:6f2ce785957f
|
40 | — | — | — |
|
TAAAGGGCCCGAACCTACTTTGCGCGGGTTTAATGAGTTA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:f3d4a7291732
|
40 | — | — | — |
|
GTAAATGTTCACCCAGTTAATTACATCAAAAATTGCCTAC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:2a5364ef623e
|
40 | — | — | — |
|
TAATTGACATAGCCCAACCCGAGTCCTTCTCTACTGCACG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:745fb1f38c83
|
40 | — | — | — |
|
ACATTCGTAAAATTAATCCCTTCCTTGATAACGTAGAGGA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:17beb0227b62
|
40 | — | — | — |
|
ACCATTCGATAGGCAAACTATATCACAAGATCCAATCATC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:199ecdeef012
|
40 | — | — | — |
|
GTTATGACGCAATCTCTCTTTTTTACTTCGATCGCACGGA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:daf15bb56bf0
|
40 | — | — | — |
|
AGGGAAATGGGCTTATATCCTTTAATTCTGACGAGGACAA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:155b8241a9e3
|
40 | — | — | — |
|
CAAAACAACCTCACGTTCCACCCCGAACTGATGCTCACAC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:814133db0df9
|
40 | — | — | — |
|
TACCATAATTTCCGCCTAACCAGTATTGCTTCCCGCTTCA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:272b21dca4a0
|
40 | — | — | — |
|
CTGGGGGCTACATAGCTATTAACTTACTTCCCCTGTGTAT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:06b4b6758551
|
40 | — | — | — |
|
AGGTAATGGACCGAAGTTCGAGATGGTGTTCCCCGCTCTT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:214c7532c2fa
|
40 | — | — | — |
|
CAGCTTCTTCGAGTCATTCTGAGTGTCATCTTACAGGCGG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:37ae6d17b51a
|
40 | — | — | — |
|
GTTAATCCAAAAGAATTCAACATTAATCATACCCTGCGGA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:1cb11203e3e6
|
40 | — | — | — |
|
ATAAACAGCTACGTTAGTCCATGCCCACAGAACAATGACA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:49f6e2fa75de
|
40 | — | — | — |
|
TGCGCTGCCGACAAGCGACTACAGCATCCAATGAGCGTTC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:05b0c893a76b
|
40 | — | — | — |
|
GAATGGTGAGGACGGCGCTAATCCATAAGCACGACCGTGG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:c6160d4357c9
|
40 | — | — | — |
|
GATGATCGACCCGCAGATCTCGCTGCCACGTTATTATCGC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7fdbe1224352
|
40 | — | — | — |
|
GCATACATGAGGAAACAGAATGTGGCATACGAGTGATCCG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:4c4ea4449bb0
|
40 | — | — | — |
|
CGCCCCTCATTCGCACCACAATGTGCAAAAGCGTTTGATT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:8be1e98f4f27
|
40 | — | — | — |
|
TTGGGCGCGTTCATCGACCTGCACACCTGGGGCGAACTCT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:fb69e61c768f
|
40 | — | — | — |
|
TTAATGAGTATAAGAGCCATTACAGCACGCGACCGGCTAG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:2fc80957b060
|
40 | — | — | — |
|
TCAGCTATGTACACTAACGTATCAGGAAGCGATCAAAGCG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:ab186284fde8
|
40 | — | — | — |
|
AAGAAAGCGCAATCTTCCGAAAGATTAGTCAAAGCGGGTC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:08f35bfd6b63
|
40 | — | — | — |
|
GCAACTAAAGTCAAAGTACCTGATTCTTACCAGCATGAGG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:11c2e1746f99
|
40 | — | — | — |
|
TCCGCAAGACTAGTTGAGGATGGCTATAAAACTTTGATCG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:10fb7e63a1cb
|
40 | — | — | — |
|
GGACGCGACCACACATTATATTCTAATCTAGCCGCCGGAA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:71cfc8db12c3
|
40 | — | — | — |
|
GTCCGCAGAATCCTTTGTAAATGCGCTCGTACAAACACAG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7255ce078305
|
40 | — | — | — |
|
CGATTAGTCCCCTGTTATTCACTCCGTAAATGCGTCTGCT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:e070c60f5a8a
|
40 | — | — | — |
|
ACGGACTAGTTCCATTGTACATTCAGTCTACGGGGTACCC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:e901b3d0f61a
|
40 | — | — | — |
|
TATCTATTTGGCTATTGCCCTAGTAAATCGCATGCGGGTA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:cc13f4c9e2e7
|
40 | — | — | — |
|
TCCTGTATTATATAGCCAGTGTAATGCCAATTGGACAGCG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:c65602437034
|
40 | — | — | — |
|
GAGTAAAAGAAGAGTTAAGTTGAAGCAGCGTTTCAAGTTG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:6bc3f46e0a73
|
40 | — | — | — |
|
TGTCGCCCCGATCGACGCTGACTCCCGTCTACGGGCCATC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:d7a315a1e31c
|
40 | — | — | — |
|
TTGACTTGTCTTGCACGATATTAGATCCGCGATATTGCAG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7bda72061554
|
40 | — | — | — |
|
ACATCCTAACCGTAACCCCTACATCAAATAACGGCCTGTG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:067b44c45232
|
40 | — | — | — |
|
AGTTCATTAACATTCCCGGGTAGCCACGGAGGAATGTCTT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:54b6ce6bd3f6
|
40 | — | — | — |
|
GACCAGACACCGATGCGCATGCGAATCAACCACCTGAAGA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7433d4e51d6b
|
40 | — | — | — |
|
TCTGGACATCAATGCGTCGCACGCGCAGATACGTTGATAT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7d5ffda7bfbc
|
40 | — | — | — |
|
ACTAAGTTAGCTGCCTGTGAATCCCATAGAGAAGAGGTTC
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:0be02e84fef9
|
40 | — | — | — |
|
TCTTATCGATGGTAGCCGACATGCACTAAGGGGTTATCGA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:7a88d3149bb9
|
40 | — | — | — |
|
TACACACAGACAGCCGTCGCGCCACGCGTTTAGTTTTGGT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:479f9e4edf8f
|
40 | — | — | — |
|
TAAGTATGAAGAAGCACTAACACACGTGCATGATGGGATG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:d62d54c15b96
|
40 | — | — | — |
|
TGCACGAGCGCTAGCCGCTTCACAGGATATGCAATTGTTG
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:ce25874697b8
|
40 | — | — | — |
|
ACACCCCGCTTTCGCCCCACAAAACTTGCCACGGAGCTTA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:1a0eba361da6
|
40 | — | — | — |
|
TGGATCAAAAATATATAAAAACTCATACGTCCCCAGGTGT
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:b05df24b443e
|
40 | — | — | — |
|
GACCGAAGAAGCGATCTCATGCGCGAAACAACGCACATTA
PANAPTA:P39880:CUX1_SIX6:PRJEB66722:R3:9e7c0178c8e7
|
40 | — | — | — |
SELEX rounds
R3 ·final