CUX1_USF2
CAP-SELEX sample USF2_CUX1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GATCAACGCTCCCGACCGCATAGACAAGTGCTCCGTGCAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:15931a0769d8
|
40 | — | — | — |
|
TGAAGCTCCAGACCCACGTGACCTTGACGCTCACGTGCGG
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:6fd873772e5f
|
40 | — | — | — |
|
GCACGTGCACTTCACTCGCCAAGTCACGTGCTAGTCACGA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:3d218f5745e1
|
40 | — | — | — |
|
TTCACCACCCACGTGACCGTCAGCTGACACGTGCCCCATC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:5182a50a8bf0
|
40 | — | — | — |
|
ATGGTCACGTGACTGTACTTACAGTGGCACGTGACCGTAA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:42586b683b2a
|
40 | — | — | — |
|
ATATTTCTTGCCACCTTCCGATCTTCATACTAACGCTGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:9fc4fea915f1
|
40 | — | — | — |
|
TCGTGATCACGTGACATCACAGCGATCCCACGTGCATAGT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:7cc6b3feef38
|
40 | — | — | — |
|
TTGTTTACAGTAGCTCGACTGACTCCCTCATCCCACTAGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:5b22e6394661
|
40 | — | — | — |
|
GTCCACACGCTCACGTGCCGATATGGACCCACGTGATCTG
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:ce6d89cd9bff
|
40 | — | — | — |
|
TTCCGTGCGGGTCCGGCGACACACCACGTGACGCGCAGTC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:db543e387fa1
|
40 | — | — | — |
|
TAAGTGTAGCTGACGCTGTCACCTGGCCGTACCACGTGAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:c43e13ff4767
|
40 | — | — | — |
|
CCGGCACCCGTATTACACCATTACCGACAGCAACCACACT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:2efe9c4f12c5
|
40 | — | — | — |
|
ATCCCAACACGTGACGTGCCTCTACCCCTCACGTGCCGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:e360a0c922b3
|
40 | — | — | — |
|
CCAACGGTCACGTGACCGCACACCGCCCCAGCATGCGCAA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:85ba955ed837
|
40 | — | — | — |
|
TCAGGTACCACGTGCCGACCTGGCGCCACGCGGTCCGCTA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:724f45e18e9f
|
40 | — | — | — |
|
TCCCCGACCGCCACGCGTGCCCTCTAATTTGGTATCAGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:cf4d78128a70
|
40 | — | — | — |
|
CGTCAAGCCCCGAAGCACTACCCACGTGACTTACGCCATC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:477a1c1b95b8
|
40 | — | — | — |
|
TTACCCACACGTGACCCTACCTACATCACGTGACTCACGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:5be5e246e4f2
|
40 | — | — | — |
|
ATGTGAGCACGCATCACGTGGTCGGCCAACTTAATCACGT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:0435b161a656
|
40 | — | — | — |
|
TACCCACGTGACCACCACGCTGCCGCGTTACGCCTACGTC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:23e2b582a13e
|
40 | — | — | — |
|
AACAATACGCCTCCCATACTGCCTGATTATCACGTGACAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:f36df41b2234
|
40 | — | — | — |
|
TGCCCACCACCACGTGACACTCCTAGCTCTCTTACCTGGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:b47db1c116da
|
40 | — | — | — |
|
CATCACGTGATCAGAAAATTGGCCCGGTATCACGTGACAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:8aa6a0df4512
|
40 | — | — | — |
|
TGCGATCACGTGACTATCGCCTCGATCTGACGTTCTCGCT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:4a8b66ed8700
|
40 | — | — | — |
|
CAACCACAAGCACGTGGTAGGACGTCGGGGCACGTGTCCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:bb3ef48f5efa
|
40 | — | — | — |
|
CAGAGTGCCACGTGCGTGCCCAATGTCCCCCCACGTGACA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:75ec44de2b73
|
40 | — | — | — |
|
CTGCGTCACGTGACCTTGCACGGCTCATACTAGTAAGCAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:7633c8cbf139
|
40 | — | — | — |
|
TACGTTTCTAGGCCCACGTGACACACCTTACCCACGTGAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:5ee350246b5a
|
40 | — | — | — |
|
ATAGCAGAAACCCCACTGGTTCCGTGCCCAGCGTCTTGAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:2a921a22fd36
|
40 | — | — | — |
|
TACACTTACGAACGGATCGACCTCCACCACCACGTGACCA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:2446b6a42e68
|
40 | — | — | — |
|
ACACCACGTGACCGCGCACGTCTACGCACTCTGGGGCCAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:e15ea22c5bc8
|
40 | — | — | — |
|
AGGAAGGTGCTCCTCTACACCAACCAGGCCACGTCACGTG
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:9365ae428885
|
40 | — | — | — |
|
ACCAAGCGATCACGTGACCACGAAGCACATGACCTACGCT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:f9fb3388b72d
|
40 | — | — | — |
|
CGACGCCCCAGCAACATCTGAAACACGTGACCCGCGTGGA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:a3cec48af9b7
|
40 | — | — | — |
|
ACCCTACCTTGGCGTAACCACGTGACCTTCAGCGATTCGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:e967f1001c09
|
40 | — | — | — |
|
TAACCCATCCGGTCACGTGATCCACTCGCGTCGTGGCCTC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:a7de6253a87c
|
40 | — | — | — |
|
TCGCCGCGAATCACGTGATCTACCCATGCATGACACATGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:b54f77020480
|
40 | — | — | — |
|
CAGGCACCACGTGACACAATGCTCTCGCACCGCCTGTTGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:b6ccc4dc987a
|
40 | — | — | — |
|
TCACGTGCGTTAAATCTTCCCACGTGACCCTACGGGCTCA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:1645ddd44508
|
40 | — | — | — |
|
CCGCGCTCGCCCACGTGACTGCATGATCGACCAATATAGC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:db0a8d3acc7a
|
40 | — | — | — |
|
AAGCACACGTGCGTAACTACACGTTCTTATACCACGTGTC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:680cbc8e98ae
|
40 | — | — | — |
|
CACGTGACTTGCGTAGCATATGCCGACTAGCTGCAATGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:a3fc88c980d4
|
40 | — | — | — |
|
AAGCGCGTGCGAGGCAGTCACGTGACATGTAGCCTTTGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:ba01a494ecf2
|
40 | — | — | — |
|
ATGTGCACATGTCTCATCTATGCACGTGATACACCACGTG
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:c7d4560259bb
|
40 | — | — | — |
|
ACGCCCGCGCCACGTGACACAGCAAGGGAGCCAACGCGCC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:cacdcb55c3b9
|
40 | — | — | — |
|
AGGAAGATCACGTGATCTGTAAGAACGATGTACGGGAGAC
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:271678f69dd7
|
40 | — | — | — |
|
CGACACGACACGTGACGAGATAACCTTGAACACGTGCAAA
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:72b1f9e0f8e3
|
40 | — | — | — |
|
TAACACCACGTGATCCCTATCACGTGACATGCGCCCGCCT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:0270db4aabc3
|
40 | — | — | — |
|
GACAGACCACGTGACTGTGCCGCAGTTACACGCGCCGCGT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:4c88f919d076
|
40 | — | — | — |
|
ACGCGCTCGCGTTGCCATCACGTGACCTCCTCTTTGGCAT
PANAPTA:P39880:CUX1_USF2:PRJEB66722:R3:49edcf51a0bd
|
40 | — | — | — |
SELEX rounds
R3 ·final