CUX2_HOXD12
CAP-SELEX sample HOXD12_CUX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AACGTGACTCGTAAATCGACTGTCGATTTACGAGCACCAA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:5d7182ccc545
|
40 | — | — | — |
|
ATTGTGCTTGTAAATTCCATGACAATTTACGAGTACAAGG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:4a463764c287
|
40 | — | — | — |
|
CCCGGCAATTATACGACACGCAATATCGTTAATTGCTGCA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:7ca9b6e7a577
|
40 | — | — | — |
|
CTTTATGACTGCCGATGTGATCAGGAGGCAAAGGAGATAA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:8ffc2af3401d
|
40 | — | — | — |
|
AGCAGTCGTATGGTGACCTAACACCAGCAACGACCCCCGC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:1bcf77eb5712
|
40 | — | — | — |
|
CCCATTCGTAAAGCGATAACACCTCGCCTTTACGATCACA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:7baad2568fee
|
40 | — | — | — |
|
AGGTACTAAAATGGTACCAGTCGTAAAGGAGCAAGCATGC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:bded7f5550dd
|
40 | — | — | — |
|
GTAAGTCATAAACGTTCCTGCGTTTATGACCACTCCTCTC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:5fc8a11d91c3
|
40 | — | — | — |
|
CCATTTACGACCAGCCGTGTACAGACGTAAATGCCGGGGA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:3b3eb84baf13
|
40 | — | — | — |
|
GATGCTCGTCGTAAATTTGACAACAACGCGAAATTTACGA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:06e14ee37b9a
|
40 | — | — | — |
|
CACAGCACATCGTAAACTGACAAACAAGTTTATCGATGTG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:43ccb052b00f
|
40 | — | — | — |
|
AGTAATAAGCGAAAACTTTATTACTGCGAATGGATGCGAT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:5b0735e0b165
|
40 | — | — | — |
|
GGGAGTATTAATTAACGCCCTTACCTCCGTTAATTAACGA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:93256c5a9e3e
|
40 | — | — | — |
|
GTGACATGGGGTGGTCGTAATGTCATGCGCACATTACGAT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:ad6b567b2ea5
|
40 | — | — | — |
|
TGCGTGACAACAAGCGCGATGCCACATTTTACGACAATGA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:185d9e99e09c
|
40 | — | — | — |
|
ACCTTAACTACCGATACGGCAGTGGACTCTCGTTTACGAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:9bfc19121c25
|
40 | — | — | — |
|
TCTGTTTACGACCTCCCAGAGACATCGTAAACCGTACCTC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:6b3f1b408430
|
40 | — | — | — |
|
GTTACTGCGGTCCCTCGTAAATCTGGCACAGAGGTGCGAG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:aaf492d779b5
|
40 | — | — | — |
|
AGTCATAAAACAGGTGTGGACGAACTGCCGTTTTATGACG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:13bdf38117bf
|
40 | — | — | — |
|
CGCGCACCATCGTCTTACAGGAACGCACATAGCGCAGACC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:f816c934b4d0
|
40 | — | — | — |
|
ACTCGTAAAAGCCCCCCCTTTTACGAGCCCGCTCGCTCCC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:70c55d081e81
|
40 | — | — | — |
|
ATCGCTACGCAACACCCGCTACGCTCATTTTACGAGCATG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:1f949221e185
|
40 | — | — | — |
|
CCTTCGGAAATACGTTTCGAATTAATTACACGCAGATCGA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:168bd0294b1b
|
40 | — | — | — |
|
ACGAAGCGTCGTACAAACGTCCCCCTTTACGACGCGCAAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:dbce1fd9373e
|
40 | — | — | — |
|
TGCACTGGTAATCATTACGAATCATCGATAATAATGATTA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:c6af6d65faaf
|
40 | — | — | — |
|
CGTAACGAGGCCATTCACCAATTTTACGACATCAGCACAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:abca880a7393
|
40 | — | — | — |
|
ACACGTGCCACTCAAATTCGCTGCATGGTCGTAAACGTTG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:24db63dcdd91
|
40 | — | — | — |
|
TGCACTCACTGCCTGCACCGCGTGAAGTCGTAAAACCGCC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:94a920faae31
|
40 | — | — | — |
|
CACGCACCAATGCAATTAATCGACCAATGAACGCGTCATT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:5133defa2d96
|
40 | — | — | — |
|
CAATTCTCACTCATCGATCTGGTGCCATCCCACCTACGAT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:f3757b59ed85
|
40 | — | — | — |
|
AGCCCGTGGCCATGAAACGCACACGCAGATCGTTAAATTG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:b4d1e439f8cd
|
40 | — | — | — |
|
GACAGTAATGACCGGTAGTCGTAAACACAGCATTTACGAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:d098d09582b8
|
40 | — | — | — |
|
TGGGAGCTGTCCCGAAACCCCGAAATAATTGTCCTACAGG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:1cf71fb04b1b
|
40 | — | — | — |
|
TAGCCTCGTTTTACGACCATCTTACCAGTGCCAATCAGTT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:3c588d177071
|
40 | — | — | — |
|
TGCCGATTTACGATGTAGCGTGATCCTTATACGCCAAACT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:98e06132948e
|
40 | — | — | — |
|
CACTTATCGTAATCGAATATCTACGGAACTGCTGCCTAAA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:1051afface78
|
40 | — | — | — |
|
AAGACCACGTCTCGTTACTATTACTACCCCCCTTCACGTG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:7a3bba5aab1a
|
40 | — | — | — |
|
AATGATTATTGATGATCCAGCACCGTAATAGTTCGACCTG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:e1562b2686ed
|
40 | — | — | — |
|
CCGTTCCGTAAGCCGACACGTAATGCAATAAAGTCGTAAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:ae5b504fb632
|
40 | — | — | — |
|
CGAAGCGTGCATGATAAATCGTTGCATTTATTATCAAGAG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:c546aca9de1a
|
40 | — | — | — |
|
CGGTAACGGCAATAAAACATAGCCGTTTAACGCGGTCACG
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:e5d7aabb6443
|
40 | — | — | — |
|
CCAATCATAAACCCCTACCAGCTGCATAGATCGATAGGAT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:e7e68dca6052
|
40 | — | — | — |
|
TCGAATCGATCGTAAAAACTAACGACAGCTGTCCCTGGTA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:e3b1d8746236
|
40 | — | — | — |
|
AGCACCGTAATTAGCCCTGACACGATCCGGTAATTACGGT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:7d8616b96c76
|
40 | — | — | — |
|
ACATACACAAAGTCGTAAAATAACCTCGAGATCGATCCGT
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:fa373a8ffab4
|
40 | — | — | — |
|
CAGCACACATCGTAAAAACGTGTTTCATGGGCTAGCGCTA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:0bcb55e67cba
|
40 | — | — | — |
|
AGCAATACCGTACGCAAGACTGAGCCGCGCGATGTAAAAC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:fed11ae075dc
|
40 | — | — | — |
|
ATTTAATGAGCTGCAGCTTATCTCATTAAATCGCGCACCC
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:d7a47a8d6b68
|
40 | — | — | — |
|
CTCTCCGCGTCAGCCGCAGTCACACACGCACAATTCCAAA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:ffddf051c1a3
|
40 | — | — | — |
|
TGCCACTATTTCCAATATGATCACCGATCTACGTTGATCA
PANAPTA:O14529:CUX2_HOXD12:PRJEB66722:R3:9909732790ec
|
40 | — | — | — |
SELEX rounds
R3 ·final