ERG_HOXB13
CAP-SELEX sample HOXB13_ERG · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCCACTCTTAACTCACACAGTTGCACACACTTCCTTCAAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:9c7743fbf8fa
|
40 | — | — | — |
|
GCAATCTAAAAAATCGATATCCTCGACGGTTTGTTCGTTA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:b1b8efa22484
|
40 | — | — | — |
|
GTTAGCGCACCGGAAAACGCGTTTTACGGTACGCGGCACA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f1f9137ed4d3
|
40 | — | — | — |
|
GCCCATTGACTTACATAACCTACCTGATTGCTACCGCGAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a09ef096578d
|
40 | — | — | — |
|
AGTAATCTCCGCGTACACCACAATGTAACTAGACGGCTCA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a85096be91bc
|
40 | — | — | — |
|
GACAACCGGAAATGTGTTTACGGTACTTCTCTTGACTATG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:52548e0319dc
|
40 | — | — | — |
|
TACTGTAGGAAGGAAATACTATTTCCGTCCTGTATGTAAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a07ca770ca5d
|
40 | — | — | — |
|
GATACTTCCGGTACACATTAGCACCGTAAGTCTCGTACCA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f23916425a55
|
40 | — | — | — |
|
ATGTCATGGATCATGTTCCGGCGTATGCTCAAGCCTCCGC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:37ac61666bd9
|
40 | — | — | — |
|
AGTACATTTCCGGTCACTTAACCGTAAATGCAAGTTGTTA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:d43ef7357c8a
|
40 | — | — | — |
|
GTTATCGCACTGCCGGCGTGCCGTAAGTGTGGTTAAAGAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:b8c4307b42ad
|
40 | — | — | — |
|
TTTAGCTCACTTCCGGTTGCGAATGGCAACAGGAAGTGCA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:de8d882245ca
|
40 | — | — | — |
|
GATACTTCCGGTCTGTAGCGCCCGTAAGTTTAGCGTAGGG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:68ab9b76d694
|
40 | — | — | — |
|
CCCAAACGTAAATATCATTTCCGTTCGTGTCCTTCCTCTA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:64b2471445fe
|
40 | — | — | — |
|
TTGAGGAGCGTGACTAGGTTGTAATATAAAGCAACTAGCG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:8eec8dcbc7d6
|
40 | — | — | — |
|
ACTTCCGGTACGCAAAGTTACCGTAAGTGTGATCGGGGTA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:3fd2f6222ffd
|
40 | — | — | — |
|
ACCGCCGTAACTGTACCGTAAACCTGTTTCCGGCACATCA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:1b36da6569e1
|
40 | — | — | — |
|
AATACACCGTAAATCATGGATTGCCGGTTTAACGATTACT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:9dfbab9c0137
|
40 | — | — | — |
|
GTTACCCATAATTTCCTAATCGATGCTTGAATTATCGATT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:efd5c0c857eb
|
40 | — | — | — |
|
GCCTTGTCCGTAAGGAAGCACCTGCTTCCTTCCGTCCTCA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a7c3e3d58da0
|
40 | — | — | — |
|
ATTACCACAGGAAATATCACGTACATTTCCGGTGGCAGTG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:558d870d8c9c
|
40 | — | — | — |
|
TTCAGGCACAGATAAGTAAGTTACTTCCGGTGACCTATAA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f1ff18cb1173
|
40 | — | — | — |
|
TAAGACATGCGTGCCCGTAAACACGTTTCCGGCCTACTGC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f43c762236bf
|
40 | — | — | — |
|
CATTTACGAAGCGTAAGGATACGTGCGTATCCGTCCGTTA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:33783c5bc797
|
40 | — | — | — |
|
GGCTACATCCGCTCGAATGAGACGTATGTTAAGCCTGATG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:623057be8ec7
|
40 | — | — | — |
|
TCCATAGACCGTAAATTCAACCTCATTTCCGGTATGCTAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:7a0ab9648ec0
|
40 | — | — | — |
|
CGTGTCATTTCCGCTCTGCGTCGCGCGATAAATGCCAGAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f35503c99980
|
40 | — | — | — |
|
TGGTAAACCGGATGTTATAACATACGGTATCGCCATAGCT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:45e39cdf475b
|
40 | — | — | — |
|
CAGCCGTAAATCATTGCTATTTCCGGCGAACCACGCCCGA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:5592214c5af3
|
40 | — | — | — |
|
TGTGACCTACCGTAAACGCATTTCCGGAGGGGGCACGCGT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:94aec2d540fa
|
40 | — | — | — |
|
TCACAGTACAGGAAACTCAACCTTCCGGTACTGTCAGCGT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:d837f57aa5bd
|
40 | — | — | — |
|
AGTACCGTAAGCGGATGGCTTCCGGTAGTACAGGCTACGC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:e58384e67300
|
40 | — | — | — |
|
GAGTTATTGTTGCCGTAAGCACCGCTATCCGGCAAGTTAA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a4c2f34ed7bb
|
40 | — | — | — |
|
GTATACCTCCCTTTCCGGTTTCCTGGACCGTAAATGTAGT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:0ae451a89b84
|
40 | — | — | — |
|
TTGCATCAGGAAATCTTATTTCCGGTTGCGAGTCGAAGGA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:f9a0531c9591
|
40 | — | — | — |
|
TATCGTAAGGAAGTGGTACTTCCTTCCGCGGAGTTCAGGT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:7e0d14c52b7d
|
40 | — | — | — |
|
GGACCAGACCGTAAGTGGAGGACATCCGGGCTGGCGACGG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:48d239d08d1c
|
40 | — | — | — |
|
CTTGACGGACAGTAAACCTAATCCAGTTTCCGGTCCGTCT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:2ecc527e9788
|
40 | — | — | — |
|
AGACAACCGTAAGCCGAGTACATCTTCCGGCCGTCACTAT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:efe27e756022
|
40 | — | — | — |
|
AAGACACGCCCCGTAAGTATAACGTTAACTTCCGGTGGAG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:05a6e32ad6cb
|
40 | — | — | — |
|
ACTTAATGTGACACGCGTAAGTACACACATCCGGTCTCAC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:16fb1e2c9101
|
40 | — | — | — |
|
CGCTGCACAGGAAGTCTAGGCTTCCGGTGCCAGAGTGCCG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a9ff5a98e6d0
|
40 | — | — | — |
|
ACGCGCGCCGTAAAACCATTTCCGGTGCGTGCATACGCAG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:df8882297033
|
40 | — | — | — |
|
TACCGTAAGCATGAACTTCCGGTCGTTTCGCAGTCGTGGA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:a6e51b508855
|
40 | — | — | — |
|
ATAATACCGGAAGTAGGACTTACCGGTGTTATTATATGAC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:1e6a0de21a4b
|
40 | — | — | — |
|
TGGCGCTACTTCCGGCATACCGTAAGTATAATCCTCCTGT
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:c7c670e88259
|
40 | — | — | — |
|
ACCCCGTAAGGTATCCCTTCCGGCGCGTACAAACTTTCCG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:9e4ae84958f2
|
40 | — | — | — |
|
ATTTGCAGCTTCCGGTCCACGAGACACGGGAAGCACGTAG
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:d4cdc3fee4af
|
40 | — | — | — |
|
CGTGAGAACGACACAGCGTAAACCGGCGTTGCCGCTGTGC
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:9589f5d1b013
|
40 | — | — | — |
|
GACATCGACGCGTAAACCATTTGTTTCCGGTCCGCTCAGA
PANAPTA:P11308:ERG_HOXB13:PRJEB66722:R3:64ce495d99f5
|
40 | — | — | — |
SELEX rounds
R3 ·final