ERG_HOXC11
CAP-SELEX sample HOXC11_ERG · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ATTCGCAACAAAATTATTACCATAATTGTCTTACACACCG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:65fe35fb1abd
|
40 | — | — | — |
|
GCGTACCGTAAATGCCACCCCGTTTCCGGTCCGCGTTCCT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:48a41f578348
|
40 | — | — | — |
|
TTGTACGCACAGGAAGCGGGCTTGCGCTTCCGGTGCACAC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:e2535f86cc4c
|
40 | — | — | — |
|
TCAGCCTCGTAAGCATGTGCATCCGGTTGACCTGACGGGT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:ea47d36b6557
|
40 | — | — | — |
|
GTATTCGTCTATCCCGTAAGGAAACGCTAGTTCCGTCCGG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:01693381e235
|
40 | — | — | — |
|
GCCAAACATTTCCGGCGTTAGCGCGATAAATGCTCGGAAG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:7609f6d10b95
|
40 | — | — | — |
|
GCTGTCTGTCACAAGCGTAAATGCTATTTCCGCTGTGTAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:032ef61a80f8
|
40 | — | — | — |
|
CCCACAACGTAAACAGGCTTCCGTTGTGACTTTCCACGAT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:16f46842fa84
|
40 | — | — | — |
|
CTGTACATACGTAAACCGTAAATGTGTCATCTTCCGGTTT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:fa44214b8c09
|
40 | — | — | — |
|
AGCACACGTAAGTAGTACGCAGACGCAATTACTTCCGGTC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:0c76917ce573
|
40 | — | — | — |
|
TTGTATTATTTCCGGTTACCTACGCGTAAATCAATACAGG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:6087fe4004e2
|
40 | — | — | — |
|
GGTCATGTGACCGGATGTTATTTACATACGCCGTCCGGAC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:050e269ddbed
|
40 | — | — | — |
|
GTGTCCCATGCCTGTCAAGGATAATTGAGCGAACTGCCTG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:0892ee3d0f08
|
40 | — | — | — |
|
ATCAATCGTCCTTGCGTTACCATAGATACGCTACTCCTTT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:8f3bc1351e26
|
40 | — | — | — |
|
GAAATTGTGCGACGCGATCGCAATTTATGCTCCCCTGACC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:0d5b76c0f277
|
40 | — | — | — |
|
TAGGACGTAAGTTCAACAACGACACTTCCGTCCTGCTCGC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:2cbcdc0f003a
|
40 | — | — | — |
|
CTCGCCCGTAAGTGACACATCGACTTCCGGGCGACATGCT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:8823c58ee4a2
|
40 | — | — | — |
|
ATCGTCGTGTGACCGTAAGCTTACTTCCGGCGAAAGCAAC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:6879f6a5ca45
|
40 | — | — | — |
|
ATTTGCGTCACGTAAGTTGTAACTTCCGGTCTCCCCGCTT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:13cef21664af
|
40 | — | — | — |
|
AGAGCAAAACCGTATATTTGGCGATTATCCGGTTATTAAC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:2535953dff2a
|
40 | — | — | — |
|
CCACCGCGGAAACCGTAAACTTCGCGCTTCCGGTTCCGTT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:2bd553eeaa03
|
40 | — | — | — |
|
GCTCAAACGTAAGTAGACATCCGTTTTGAGCGGAAATATA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:e2aca47d5afb
|
40 | — | — | — |
|
TCCACCGGCAGGAAGTGTACTTCCGGCCATGGGACGATCA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:4a240ab80ae8
|
40 | — | — | — |
|
AATGCGTAAGCGTAAACATTGAATCCGCTTCCGGTTGTAG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:3b8a32f88e62
|
40 | — | — | — |
|
CCTCCATTTCCGGTGGTTACACGTAAATGGAGATCGATTT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:9cb29ae690d1
|
40 | — | — | — |
|
GAACACTTCCGCGCTCAGCACGCGTAAGTTCCGATACCGT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:4eb91afda19a
|
40 | — | — | — |
|
CAAGACCGATAAGGTATAACTGCCTTCCGGTCATTATTGA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:3df6b9ab41c6
|
40 | — | — | — |
|
AGACGATAGGAAGTGTAAGTGTCATGCACTTCCGCTACCT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:5a28a467d80a
|
40 | — | — | — |
|
TCCACCGTAAGCGCGTGACGCTTCCGGCGTAATCAGGAAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:565150e8d5ee
|
40 | — | — | — |
|
TAAAATCGCGTAAACAGTAAGTAACAACATTCCGTTTCCG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:a765c86e0766
|
40 | — | — | — |
|
CGACAGGATTTAGTATGTACCACATCCGAAATCCTGTCAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:38dab308a39c
|
40 | — | — | — |
|
GCGATCACGTAAGTAAGTACTTCCGGTCAGCTAGCAAGCG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:aded52ddc181
|
40 | — | — | — |
|
GAATAACGTAAGTTTTACGAGTTATCACACTTCCGTTATA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:b88db3f839b9
|
40 | — | — | — |
|
AGCCGTAAGGAAACTCCCGTTCCGTCCGGCGTCGCTGTTG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:29cab65f0db7
|
40 | — | — | — |
|
CAGGCAACAGGAACTTAGCAGTTCCGGTTGATGACGGTAT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:19f9553bcb4e
|
40 | — | — | — |
|
CCTCCTCCTGCGCCGGAAGTTTGAACTTACTGCTAGCCTC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:de3365d7d7f3
|
40 | — | — | — |
|
GTGCATCAAGCGTAAGTAATGAGACGACTTCCGCTGCAGC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:db69d7af5bce
|
40 | — | — | — |
|
CCGGAACGTACTACAGTATGTGCACACATCCGGTTGACTC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:3a6960c3aa59
|
40 | — | — | — |
|
CCTCAAGTACGGAAGGAAATGGGTTTCCGTCCGCCCAACT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:d02571ee833d
|
40 | — | — | — |
|
TACTGCCGTGAAGTACAACTTCCGGCGAGCGATCCGTGCA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:d17b4b6b9ac5
|
40 | — | — | — |
|
GGCGGAAACGGAAACGGATGTCCGTTCGGTTGTGTTTATG
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:23f3b79a15ef
|
40 | — | — | — |
|
ACGGAAATAGGCCTAACTTCCGTCGGCGTGACGTAAGTAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:d9aeec3b342c
|
40 | — | — | — |
|
GAAACGTAAATCATGTCGTTACTGATTTCCGTTTCACTGC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:317125d7e47b
|
40 | — | — | — |
|
CTTCAGCTTCCGCTCAGTATGCCAATGCATCCGGAGGAAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:305b0e6b3580
|
40 | — | — | — |
|
GCAAGGCACCGTAAAGGATGCTGTTTTCCGGTGCCTTGGT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:b4a499e9d5bb
|
40 | — | — | — |
|
AGTCCGACTCCAATTCACCGCTAAACACGTTTCCGGTGAA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:b98889ba136a
|
40 | — | — | — |
|
CTTTATGACCGTAAACCACTTTCCGGTCTACAAGTGAAGC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:5d68ac35f176
|
40 | — | — | — |
|
CCCTGCAGGAAGTAAGCCTGCTTCCGTCCTTAAAATCGGT
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:7e3215aaee48
|
40 | — | — | — |
|
GAGTAATTTCCGGTCCGCTGCACCGTAAATTTAGTCACTA
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:f97a7010b873
|
40 | — | — | — |
|
GAGCCGGAAGTGCACCTGCACTTACTGCTCTGTACGGAAC
PANAPTA:P11308:ERG_HOXC11:PRJEB66722:R3:5ccbb01daf46
|
40 | — | — | — |
SELEX rounds
R3 ·final