ERG_MSX1
CAP-SELEX sample MSX1_ERG · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GGGAGAGGAACGAAAAGGTAAGTCCACTTCCGTTTCGTCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:cf00c254a217
|
40 | — | — | — |
|
ACCGTACCGTATGTGTACAAGCTCATCCGGTAGCGCAGTT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:dd98fc37b74c
|
40 | — | — | — |
|
GCGGAAGGAAATAGCACACATTTCCTTCCGCATGTCACGG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:7b15d7181230
|
40 | — | — | — |
|
GGACCACATCCGGTAACAGAACGTGACACCGTACGTGGCC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:533f4255e8c3
|
40 | — | — | — |
|
TGCCAAAGTTTCCGTATTTCCGTTGACAAGTAAATCCGGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:449610913bb1
|
40 | — | — | — |
|
CTGCAGCTTCCGGTCTCGGTGCGCTGACACGTAAGCTACA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:60c743721dcb
|
40 | — | — | — |
|
AGCAGGAACCGGAAGTCCACTTCCTGTTCTTAACGTCGGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:ff3d79b03138
|
40 | — | — | — |
|
GAACGACGTTTATCAGTAAGTGGGACTTCCGGACACACGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:e001c0cedb9b
|
40 | — | — | — |
|
GGAACATCCGGTGAGCCATAAACCGTATGTTAGGTCTGCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:4ecefa279707
|
40 | — | — | — |
|
CCACCCATCGACCACACCGTAAGTGAACACTGCCGGTGCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:7100e55f3d30
|
40 | — | — | — |
|
AAACGTAAATCACGAATTTCCGTTTACACATAGTTGAATT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:16c6baf5324b
|
40 | — | — | — |
|
CCCAACCGGAAATCTACAGCAGCATTTCCGGCTGGACTGT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:4ed24462af07
|
40 | — | — | — |
|
GCTATGCTTCTGACCGTAAATCGACGATATCCGGTCGGAT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:b5dc48b7547a
|
40 | — | — | — |
|
GTGCACATCCGGTAGCGAAAGCTGAGACCGTATGTCCCTA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:8e4e3b93d018
|
40 | — | — | — |
|
TAGGCCTACTTCCGGCCCAGTAAGCAGTAAGTACGCAGTC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:e724bb734585
|
40 | — | — | — |
|
AATTAGCAAGACGTAAACTCGTTTCCGCTGCCTAAACATA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:2a4a214398d6
|
40 | — | — | — |
|
GAGCACCGTAAAAAGGGAGTTTTCCGGTGCGTACCGAGCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:500b0006942a
|
40 | — | — | — |
|
CGACGTAACTCGTAAATTAATTTCCGGTACGTTCAAGCGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:5110b4162750
|
40 | — | — | — |
|
GACTCGTAAATGGTCCGTAAGTTAATACTGCCGGAGGACG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:c36e8b9c9833
|
40 | — | — | — |
|
GACCCTCCTACGTTTCCGGTATAACGCGTAAACGACCTAC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:9518f5b26fe1
|
40 | — | — | — |
|
CTCACCGAGAAACAATATGGAATGTGTTTCCGGTGATTGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:87e199345804
|
40 | — | — | — |
|
ATCAAACAAACCGGAAGTACGACAACTTCCGGTTCACACC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:1d26d481eb46
|
40 | — | — | — |
|
GTGTCTACTGCCGAGAAATTGGCATTTCCGGCAGACACGG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:25a53df30a86
|
40 | — | — | — |
|
CCATACCGGAAGTCAAACCAACTTCCGGTATCCCCAAAAG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:4b3e9cab2b92
|
40 | — | — | — |
|
GATCCGTAAGCGAGACACCCTCCCGCTTCCGGCCCTGTCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:d2368dd8837b
|
40 | — | — | — |
|
GTATTCGATCCGTAAGTGTGCACTTCCGGCATTCTACAGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:04d8ef35d8d8
|
40 | — | — | — |
|
TGCGACCCTAAGACAGGAAGTACAGGAACTTCCGGTCTGG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:6d8074e8e590
|
40 | — | — | — |
|
ACTGAGGCACGTAAATGGATTTCCGGCCCTATTAATCACA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:0cffdf3516b6
|
40 | — | — | — |
|
TGAGCGCCGGAAGTCGTGCTTAAACTTACGGCGCTGCGCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:7116b906a814
|
40 | — | — | — |
|
TACTCTACTATTCCAACACATACCCCATCCACCTACACTG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:dc6227608833
|
40 | — | — | — |
|
CCCGGTGTGGCACGGGAAATGGATTTCCGGCCCCACTTCC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:755cdfee1e0a
|
40 | — | — | — |
|
GGCACACGTAAGATGAACTCTTCCGGTATCCCACGCCAAC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:29fe859b26e3
|
40 | — | — | — |
|
ACGCACCGGAAGCATACTTACGGTGACCCAACACATCTGG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:d9c3f13dda62
|
40 | — | — | — |
|
CGTACAACAATTTCCGGTGCATGGCAACCGTAAATAGTAA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:b91de01c33c7
|
40 | — | — | — |
|
CTTAAAATGAACCGGAAATCAACATTTACTGTTCATAACG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:38caac3e6764
|
40 | — | — | — |
|
TGCAAATCGTAAACAAGCTTCCGGTTTGCATGTAGAGGAA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:67c13084269b
|
40 | — | — | — |
|
CAATGCACCGTAAATGCAGGGCATGGCCGGTTGAAGATTG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:fda42fbd8bf5
|
40 | — | — | — |
|
CCCACGCGTATGCTATAGAGCACAGCATCCGGTGCTACGT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:6cde27c53dab
|
40 | — | — | — |
|
AGCCGCCCAAGTAAGCATGCTTCCGTCGGCGGTCTGAGAT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:3574ca900d10
|
40 | — | — | — |
|
CACGCACCAGCTTCCGGTAGCGCCCCGTAAGCTCGCGCGG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:606a5594e910
|
40 | — | — | — |
|
TAACAGCCTACCGGAAACCGGTTTCCGGTACGTATAAGCA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:86ffb2952b56
|
40 | — | — | — |
|
TCTTAATGCACACGTATATCCATGAGTATCCGGTGCCGAC
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:d435ebe68ec3
|
40 | — | — | — |
|
TACCGGATGTGAGAGAAATTCAAACTTACGGTATAACGCG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:ccff99ef4806
|
40 | — | — | — |
|
GCTATCAACGTTGAGACCGTAAATCAACATGATTGCCGGT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:62ac7ce3f853
|
40 | — | — | — |
|
CTATCCAGTATGCGACAGGAAATTCATTTCCGGCCACATA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:b5edc066c842
|
40 | — | — | — |
|
CAAAACCCCAAAACCGTAAATCACAATTTCCGGTACTGAG
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:13dc7427b115
|
40 | — | — | — |
|
CCACACAGGAAATAACAAATTTCCTGTCTGACGTGCAGGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:80f40eadb6c3
|
40 | — | — | — |
|
GGAAGCGTAAATTAATGGCATTTCCGCTATTATGAAAGGA
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:8b82eb64a9e0
|
40 | — | — | — |
|
CGGTAACACACGAGAAATAACGTATTTCCGGTAAAGTTCT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:91d366f23a71
|
40 | — | — | — |
|
AAACAGAAGAGGAGAAACCGTAATTACGCTAATTCCGGTT
PANAPTA:P11308:ERG_MSX1:PRJEB66722:R3:d1a62f8c8e4b
|
40 | — | — | — |
SELEX rounds
R3 ·final