FOXA1_GATA6
CAP-SELEX sample GATA6_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTAAGCAGGTTACTTTATCACCAGTATGTGTAGGCTGGTG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:d59009c637da
|
40 | — | — | — |
|
TACGTTATACCGTAATGACAAATTTTAATCATCGTAAAGT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:039da2f16fb8
|
40 | — | — | — |
|
TATCCTTACCCCCCCACTCCCACCAACTACACACCCACAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:422e8ee351ae
|
40 | — | — | — |
|
GGACGATAACGATGTGTTTACGTTATCGTCAATGTTTGCT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:811b6f557fa2
|
40 | — | — | — |
|
CCTCGCCCGCCACTTCCCTCTCAGCGAATATCCTGCCCCT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:56c62b9e5429
|
40 | — | — | — |
|
TAAGTGATAAGCACTTATCGTATGTCAATATTTGTGTAAC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:5523013827a6
|
40 | — | — | — |
|
CAGTACACTCTTATCGTCCTCCCCCTACCGTCTTCGCCCG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:f5978e4b62b5
|
40 | — | — | — |
|
AAGATGAACATAAACCGAACGTGTGATGAAGGTTCATATA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:9d8e9ccccd2e
|
40 | — | — | — |
|
TACGATAAGTACTCCTTATCGTACTATCTGAACATGCGAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:ad1963f2b271
|
40 | — | — | — |
|
TAAGAGTATGTCAATATTTACATAACTACGATAAGATTGC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:c3f6e8577e97
|
40 | — | — | — |
|
CGAGAACGCGATAAGGATAAGTGATTGCTTATCGCGGTGG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:e6571b87185b
|
40 | — | — | — |
|
TAACGGATAAGGTAACTTGCCCTTATCTGAATAATGCTAA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:6dd5665643f6
|
40 | — | — | — |
|
ATGCACTGCCCCTGCGTTGCACTACAAGTATTCCCTTCTG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:630a3f4fb167
|
40 | — | — | — |
|
CCACATGCCTAACCTCCCCGCATCATCACCAGTTTCCCTT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:db68d5fe4e71
|
40 | — | — | — |
|
TAACAATGTTTACCTAACTTGCGCTTACGTGTATGCCTTA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:e883f43cede7
|
40 | — | — | — |
|
TGCTATCTCCCCCCATGTACCACTAGGTGGGAAGATAGCT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:50137262d963
|
40 | — | — | — |
|
GCAAGATAACATACACGCGGCATGTGGTGTTATCACGCTA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:c77568600022
|
40 | — | — | — |
|
CCAGGACCGCGGAATTCGGTTTTTAGCAACACTGCTGATA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:843fde245ce2
|
40 | — | — | — |
|
CCCCTACGAATACACCTTCCCTCCTTCGGTTCGTTGCAGA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:16a14a6368e8
|
40 | — | — | — |
|
TAACCACGAAGTAAACAGTCGTTGTTTACTTACGCTAGAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:58788cef5239
|
40 | — | — | — |
|
AGACGTTAATGACACATTCGCATCCACCGAAGCAGCACAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:ab5f49b56fd8
|
40 | — | — | — |
|
GAAATTTATACAAGTTACGCTCCGATAGTAACCACCTCTT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:cb793df83422
|
40 | — | — | — |
|
ATAAATAGCGATAAGAAGTACTACTTTATCGCTGTCCACA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:cc4096009c16
|
40 | — | — | — |
|
TCCCTCGCATGCCCCTCCCTAGAATACCTGCCACTCTCCC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:b07fbb6f62c7
|
40 | — | — | — |
|
CGATAAACCCTTCCATAGATAGCATTTATCGTCGTTGCCG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:0753140e4417
|
40 | — | — | — |
|
TGGCTTATCGCGGGCAAACTAGCGATAAGCACGCGTATCA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:1d3e8516b9f0
|
40 | — | — | — |
|
TAATTGGTCAGGTTTATTCTGATAACATATCGTTATCAGC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:62f7aef883b9
|
40 | — | — | — |
|
GTGATAACACCGTCTACGTGACGAGGTTATCATCCATGAA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:82074edd1853
|
40 | — | — | — |
|
CCCCCAACCCGCCACTACGACTTGCTAGCTCTCCCCCGAA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:955bcddeb6fb
|
40 | — | — | — |
|
CCTGGTTGGCGATCCTCCCACAATTCTGCATCTGCCCTGG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:3e76afa8e7cf
|
40 | — | — | — |
|
CTCTTCTCCGCTATCGCCCCCTAACGTCCCCTCACGTAAG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:a156741dcbf7
|
40 | — | — | — |
|
TCCCCACCTCCACTCCCGCATCATCCCTCACTACCCACTA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:a40a7d8f9edb
|
40 | — | — | — |
|
CGTGTATGCGATGCCACTGACACCATTATGCCTCATCCCT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:d54bd102d939
|
40 | — | — | — |
|
GAAATCACCCGCCCACCCGCCTCACGCTGACCACCGAGCC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:46656c733c4f
|
40 | — | — | — |
|
TAAGCATTTAAGTCAATATCACCTTATTGACATATGTAGT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:961cd24552aa
|
40 | — | — | — |
|
CGAGGGACTATCCCCAAGGCGCCGAATGAGTCAACACACG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:853953fce30c
|
40 | — | — | — |
|
CCCAACTACTCCATCGCATGAGCTTGCGCCTCAATCCCCA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:789bd722f702
|
40 | — | — | — |
|
CATCGCTCAAACCTAATTATGGCTAATTATCGTGTCAGGC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:a78b5451fda1
|
40 | — | — | — |
|
AAGTGCCGCGACACCTCATTGCTCGAGCTAATTACCAGTT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:2d43a26a0a57
|
40 | — | — | — |
|
ACTGACAGATAAATACACAGTAGTTATCTGACACTATACA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:1c54fb318188
|
40 | — | — | — |
|
CACCAATACGTGTGTTGTCTAAATAACAACGTACTTATCC
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:dab645bce7d7
|
40 | — | — | — |
|
TAACAAGATGATCGGTACAGGAAGTGACATGGCGCGGTAG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:d8d09c5f1c21
|
40 | — | — | — |
|
ACACGTGATTTCCGATTACCGATATTGCTCCGATCCTTAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:38e031a03c7e
|
40 | — | — | — |
|
TAAGATAGCAATCCGTGTGTGCGAGATCAACCTTTACCCG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:39c625271de1
|
40 | — | — | — |
|
TGTTTACACCGCGTGTTTACTTAGACGAACATATGCTGAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:db38dffa8b5d
|
40 | — | — | — |
|
TACTGATTAAATATTGACACTACATTCGCATCGAAATGAT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:849c517161c8
|
40 | — | — | — |
|
TCAACTACGATCTGACTCTTTACCCTCCGCCACCGATTCG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:ae9c6af8a3cf
|
40 | — | — | — |
|
CGAGATAATAGCAGTTATCTCGGACGACCTTCATTACGCT
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:410af5fa56b7
|
40 | — | — | — |
|
CATTGCTGATAGTGATTCACCACTATCAGCCGGTCAGCCG
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:972da3db7f0f
|
40 | — | — | — |
|
GTGCTGCCTAGCCCCCCCTTCTCGCCTACGCACCCTGTCA
PANAPTA:P55317:FOXA1_GATA6:PRJEB66722:R3:3aad7d555224
|
40 | — | — | — |
SELEX rounds
R3 ·final