FOXA1_GSX2
CAP-SELEX sample GSX2_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GTTAGCTAATTACTTCATTAGCGATTCTGCGATCGTGAGT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:be22fe777b2e
|
40 | — | — | — |
|
GACACGTTGCTTGGCCAAGTGCTATGCTCGCCAAGCTTTG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:db36605b741d
|
40 | — | — | — |
|
TGCGCCCTTACGGGGCTATAGCACGCCAATTCTGCACCTG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:ef9589317f06
|
40 | — | — | — |
|
TGGCTGACGTATCTGTATGAGCCAAATCCCTTAACACCTA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:dcd3bbad5bc3
|
40 | — | — | — |
|
GCAAGGGCCACCCTAACATGCGCTTCCCATCTGGCAGCAC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:0a579d311699
|
40 | — | — | — |
|
AGGCTACGAATGACGCCATGCGGCTACGCTGGAACCGACG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:d04fb5a72bf2
|
40 | — | — | — |
|
TTCCTGGCAGATATATCTATCACATGACTTCGCTTATGCC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:1ab158d54022
|
40 | — | — | — |
|
TGGCTCAGAGACGTTGCTGTGGACCAAGACGGACGGGTAA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:4a0b4e9bee62
|
40 | — | — | — |
|
GTTCGTTCGATCAACCGCTGAGACACTCTATAAAGCAGGA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:7cba0727f775
|
40 | — | — | — |
|
CTTTACTGGTGGGATGTGCGTCAACTGCATACAATAGTGT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:5edb782832a8
|
40 | — | — | — |
|
CTTGACATACTCAGCCCTGTGCTGTTTCCATTCTATTTAG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:1571a51a5a36
|
40 | — | — | — |
|
ATGATCGGCGTGCATAGTCTAAGGGTAGACCATACACCCG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:aa676ecf5214
|
40 | — | — | — |
|
GTACTATATGATCCTCATTTTAGTTTCATTCCTCTTTAGG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:1298b84b6433
|
40 | — | — | — |
|
AGTCAGAAACGTGCGGAGCCGCTGCTGGCAGCACAATTAG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:838480a51fb5
|
40 | — | — | — |
|
GTAATCCGGTAGAATGGCCCTATGCATTACGCCGCTCCTT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:a046560592bd
|
40 | — | — | — |
|
TTCTCTTTACTGTTTGCTGTCGTGAGTTAAACATCACTTC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:8f7c4912766e
|
40 | — | — | — |
|
ATAATTTAATTAGGTGAGATTGTGTCGAGTGGATGGTCCA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:a9b2c5a2de17
|
40 | — | — | — |
|
GGGTCGTTAAGATGCATAAACTTAGGTGTAGTTCATACAT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:e62fd74375f8
|
40 | — | — | — |
|
CATTCAATCTTTAAATTGGCGTTAGTGTTGACTTAGTTAC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:5752c03edc6b
|
40 | — | — | — |
|
GACGCCTCGGTCTCTTCCGCCCCACCTCATCGCACCATCC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:270119836e59
|
40 | — | — | — |
|
ATTTACGACATTGTTTACATATTGGCTACACGCTAATTAT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:913fcaa8a35b
|
40 | — | — | — |
|
TATCATTACATTGTCGTTTGCTTTTGTTTACTTACTATTC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:27f1d3306221
|
40 | — | — | — |
|
ATAATTGGAAGTGACAGGGCCTCAACGGGTTGCCAATGCT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:87dc101a0003
|
40 | — | — | — |
|
TTCGAGTGCCATTAAATGAGCTGAGCATTGACTTAAATTG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:3f469f77a017
|
40 | — | — | — |
|
AACCCGTCTCGTGTTTACATAGTCTTATTTGCATAATTAG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:4209e52453c2
|
40 | — | — | — |
|
TTGTTTAGCTTACGATAGCATGCAATTTGTTTACTTAATA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:544c46941986
|
40 | — | — | — |
|
CACAGTGACGGCTTAACTATTATTGACATAATTGTTGCGT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:b4118743adba
|
40 | — | — | — |
|
CCCTCCCGCTCCGATCCGCCATATCTCCGCACTCCTGCCA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:b69d7c109851
|
40 | — | — | — |
|
ACAAACGCAAACAACGAATATTTACTTATGCAACGTAATG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:636c8d62c40d
|
40 | — | — | — |
|
ACCTCTTAATAATGATCTAACTAGTTTGTTTACTTTAATG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:31df0c8407ac
|
40 | — | — | — |
|
CCCAACGTTACTGCCCACTACCGTACAACCCCAGGACAAC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:03670741c6d8
|
40 | — | — | — |
|
GTCCAATCTGTTGACATAGTGTCAAAATATACATCAAATA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:42f49cdf26bb
|
40 | — | — | — |
|
AAGTACACATAAATACGTAAATATGATTAGTACATTCACA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:bb7847e66e84
|
40 | — | — | — |
|
GTACACAATTAAATTATTCCCTAAGTAAGCAATTTGGACA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:b3f9559ea3ae
|
40 | — | — | — |
|
CTTGCGCGACTTACGTCTAATTACGCATAAACTGCCGCAA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:a8139ba13577
|
40 | — | — | — |
|
GTTTATTTTCGAATTATGTAAATGTCGTGTTTACTTATGA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:212b10ededf7
|
40 | — | — | — |
|
ATGAAGGCTATGTAAATATTGTAACGAGTATTAAACACAG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:bd8e86f1d076
|
40 | — | — | — |
|
TTCCTTCCTCAATTAGTGTTTAATTTCCACTGTGACCTAA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:8469cc8f455f
|
40 | — | — | — |
|
AAACAAACAGTAATTAGTGACTATGCTTGTGTAAATAGAG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:53a12fbfcb93
|
40 | — | — | — |
|
GTATCTACACATCAAATTGGAAATAAATAACAATACGTGA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:eb99ddbb86d1
|
40 | — | — | — |
|
GGCCTACAACCGTCTCCGCCAACCCTTTATTTGCTTAATA
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:3427561a45ec
|
40 | — | — | — |
|
CCCTACTAATGCGGCGTTAATGTTTACATAACCAAGATTG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:25294f4820f7
|
40 | — | — | — |
|
AATTGCGTAATTACAGCATTATTTCCATTTGTTTGCCTAT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:10c000203c2e
|
40 | — | — | — |
|
GCACCCTGATAATTACACATCAATTTGTGAACATTACGTC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:198ffb0ddd9a
|
40 | — | — | — |
|
GCTTATGTCAATATTTACTTAAGCTTGATTGATATTTCCT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:6dd46fee932b
|
40 | — | — | — |
|
GTGGATGTTACATACACATTCTACATAGTGTGCATATATC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:900f33024034
|
40 | — | — | — |
|
TAGACTACTGTTTACTTAGCAATAATTGTTTGCATAAGCT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:7e275f4aa801
|
40 | — | — | — |
|
GCTGAGCAATCCCCTTCCTACCGTCCCCCCACGCTTCCTT
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:57ee408c70fd
|
40 | — | — | — |
|
TCAACATCCGTTTGTTTACTTAGTGGCCGTAATTAATGCG
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:c23464cb1c01
|
40 | — | — | — |
|
TTGATCAGTTGAGTAAATAACGATTGTTTACTTAACAAGC
PANAPTA:P55317:FOXA1_GSX2:PRJEB66722:R3:3094f660205c
|
40 | — | — | — |
SELEX rounds
R3 ·final