FOXA1_HOXC11
CAP-SELEX sample HOXC11_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACGTGAAGAGTCACCAACCTCCCCCTATCCCCCCTCACAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:8dffd195ff3f
|
40 | — | — | — |
|
GCAAACAAATCGTAAACTATACGACATTTCACCACTTCCC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:eeb6adf56735
|
40 | — | — | — |
|
AATGTTGACAATTATTCCTGGTATTGTTTCCTCAGTCACA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:a9061414a4ad
|
40 | — | — | — |
|
GTAAACAAATGCGATGTTTTACGAGGTAGTTGGGTAAACA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:8bc698ccb9f4
|
40 | — | — | — |
|
TTACTTAAGCACACCGTAAATAATAACGCAGATAGTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:ead04a6cb178
|
40 | — | — | — |
|
CCCCTTAACGATCTTACGTCATACTGGATCGTTAAGAATG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:5e29b5d0b981
|
40 | — | — | — |
|
GTTGTCGAATCCACCGCGCCAGGAATATTCTTGAACACCC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:74ef3a07ce9e
|
40 | — | — | — |
|
GTCAACAAACACGCCACCTTCCATCGAGTACGCGATTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:1f43a5a2a312
|
40 | — | — | — |
|
CCCCCCTTTTACGACTTTTCCTGCGATCGTAAAATCGGAG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:330ec526da0b
|
40 | — | — | — |
|
GTCAACATCGTAAAAAGGTACTGCACACTAATCATCACTG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:200a378de989
|
40 | — | — | — |
|
CACTCCCCGTCATTAATTCCGCAGATCGTAAACACGCGCA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:76354166c762
|
40 | — | — | — |
|
TTACACAAGCATCCCACGTCGTAAAACACGCAATGACCGT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:4d54649f61c5
|
40 | — | — | — |
|
GTAAACAAACCCTCAAGGTACGAGGATGTGTTTGATTTAT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:ae9aaa57f344
|
40 | — | — | — |
|
ACGGGATAGTGACATATATTGTCGTGAATACATATCACCA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:92786aebbf47
|
40 | — | — | — |
|
TAGATTTACGACATGGCTGACAATGTTTGTTCGAGTTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:0f4f9f78410e
|
40 | — | — | — |
|
TTACACACTTAACGACACAATCACCATTCTTAGTGTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:8ab3f8c95158
|
40 | — | — | — |
|
CTTACTCTGTTTACTTTAGCTGTAAACACCCCGATTTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:ba8eb4705925
|
40 | — | — | — |
|
AATTGACCGTTTATCGCACGTTTCTTCTCCATCACCGCCT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:3a7254f3d5ad
|
40 | — | — | — |
|
CTCAATGTATGTTTACTTTACGCTTCCGTTTGTGTTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:6305f4207fff
|
40 | — | — | — |
|
ACACACAGATCACTTATGCTATGTTTACACAAGCATTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:105b82a58e37
|
40 | — | — | — |
|
AAATAGACGTTGTTTACTTAGGAGCATATCGTTAAATCTG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:bab7079d6e04
|
40 | — | — | — |
|
CCTAGCCGTCCCGACACGCTTCGTCAACAGTGAATCCTTG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:b39edfd54e3b
|
40 | — | — | — |
|
GTAAACATGCACACGTACGCATAGCCATAATAAATTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:3eb7c23d8e63
|
40 | — | — | — |
|
TTATTTTATGGCGACACTAGTTGACCCATAAAATCCGCTG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:6300838b7150
|
40 | — | — | — |
|
TTACGACTAGCAGGCACAATGTTTACATAAGTGACGGTGT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:5326f4a4fcd7
|
40 | — | — | — |
|
GTCAACACCAGCGGAGTGCTAATATAGCCGGTAATTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:8456b75a5a58
|
40 | — | — | — |
|
TTACATAACGTTTTATGACCTTTGTACTTTAATTGTACGG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:db218b7a7b80
|
40 | — | — | — |
|
TTACATAAGGATGGTCGTTATGGCATGTATGTTGACGTGA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:6506084ab483
|
40 | — | — | — |
|
CAACACCGTTATGACACGGTATGTGTTTTATGACCCACGC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:1c225a513760
|
40 | — | — | — |
|
TTACACAGACTTTATGACATGTATTTACGACCCAACACAG
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:c21737e60f95
|
40 | — | — | — |
|
CCGAAAGATGCTTGTAACGGTCACACGCGCCTCTTTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:8cf97bfad68c
|
40 | — | — | — |
|
AGTGTGTGCAAGGGGTGTAAGGTATGTTGGGACAATTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:4a37b7fd87f2
|
40 | — | — | — |
|
TACATCATAACCATCTACCTAACTGCACCACGCATTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:c8f160bdfe4a
|
40 | — | — | — |
|
TTGCTGTTTTATGATCAGCATACGTCAAACACATTTTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:9ce14c675e4e
|
40 | — | — | — |
|
GTAAACAGATTCTGCTCGTTAATCACCGCCCTCTGTTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:2b55056c52ac
|
40 | — | — | — |
|
ACGGAGGACGACGCACGATTTTTAACGACCTACTTGTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:25391291d3d4
|
40 | — | — | — |
|
AGCCGACGAACCCTGAAGAGCTTTCATACCGTTGGTGAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:94efc8997dde
|
40 | — | — | — |
|
ACACTGCGTAGCCCCTTAGGTAAATACTGGTACATTTAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:bde687ef04f5
|
40 | — | — | — |
|
TTACATAACAACACACCGCACATAATCGTAAATGACGAAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:5e8a83b5f2b7
|
40 | — | — | — |
|
TTACGACGTGCTGATCGTAAACAATGTTCTCGAATCGCAT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:a777495178af
|
40 | — | — | — |
|
GTAAACATCGTTAAACGAGAACAATACTTATGAGTTAATC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:9f52dc83c863
|
40 | — | — | — |
|
ACTAAAGTGTGAGCGTATTGTGTGCTTATTTTACGACCGT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:ed49b5d48286
|
40 | — | — | — |
|
GAGCATAACACCTTATCACATTGTTGACAGTGAAGTTTAT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:a75634c46b44
|
40 | — | — | — |
|
CACCGCCACCGCATTACGAAACGTAACGTAGCGAATTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:424a065689e6
|
40 | — | — | — |
|
TAGTGCAAATATTGCTGTACAGTGATCGTAAAACGCCCGT
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:69c76e32af46
|
40 | — | — | — |
|
GTTCATTTGTTTACACAAGGCTACGACCACTTTGTTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:9ca00f8712aa
|
40 | — | — | — |
|
AGCAGGTCTACCTGTCTTTCATGTACCGATATTTGTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:690627139ca2
|
40 | — | — | — |
|
CAATCGTAAGCGCGACCAAGTAGATAAACAAACATTTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:22b25b2880e8
|
40 | — | — | — |
|
TTACTTAGTTGCATAAAACGTGAGTTAGCAATGTCGTAAA
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:188252a3890c
|
40 | — | — | — |
|
GCAAACAACCTACAACGCACCACGTCAACCTAGTATTTAC
PANAPTA:P55317:FOXA1_HOXC11:PRJEB66722:R3:a507abdbce18
|
40 | — | — | — |
SELEX rounds
R3 ·final