FOXA1_LMX1B
CAP-SELEX sample LMX1B_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCGGAAACACCAGCCACCCCCTCCACGCTGGCAACAGTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:34467740dc5b
|
40 | — | — | — |
|
CGCGCGACACCAATAGCTGCCGCGTACATAGTTCCATATA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:f15abcb7e8a6
|
40 | — | — | — |
|
CATATTAGCAACTGATCGACATACTTCACACCTCCTATAC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:60f68fab0d05
|
40 | — | — | — |
|
CATCGCTTTTTTACTGTTAGCCACCCTGTAGAATCAAGCT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:40b21e8ea610
|
40 | — | — | — |
|
GCGTGTAATTTGAGCTTCATACTCTCCGCGTCTCTCGTCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:e938149b0096
|
40 | — | — | — |
|
TCACTAATTAAACATTGCCTTGTTTACATAAGCATGGTAT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ed21bf8b9c68
|
40 | — | — | — |
|
TTACGGCCCTTTGCTCGCCTGGCCTACTTAAGCTTGATAC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:e137ec65fbb7
|
40 | — | — | — |
|
CGGCCGCTTGTCCGCCGTCCCCTTCAACGTGTTCTCTTGC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:1e4ce8655926
|
40 | — | — | — |
|
AAACCGACCACGCTTCCAGCCACGCCTTTCCCGACCCACC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:93ecfa494775
|
40 | — | — | — |
|
AGGTGATCAACTTCTGCCCAGAATCCACAACAAATGCATT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:2e975b2c537e
|
40 | — | — | — |
|
ACACAGTGCAAACAACTCTACTAATTAAACACGATACGCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:cb428a1f0eee
|
40 | — | — | — |
|
AACAAATACTTAGAACCTCCCACTGTGACACCTGGACAGC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:5155fcc6a0f9
|
40 | — | — | — |
|
GCTGTCACGAAACAGTCTTCGCATAGGTCGGGCCTTCTCT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:30620d6080ac
|
40 | — | — | — |
|
TAATTAGAGCAAGTTTGCCTTCGTTGTGTAAATATTGACT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:0b1313e4fb83
|
40 | — | — | — |
|
GTATGTCCGATAAGGCGCACTCGGAGCGGGTAGATGATTT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:507fba1059d1
|
40 | — | — | — |
|
ACGCTAATTGCTGCCATTTACGTTTAATTTGCGTCCAGTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:243078d6f8bd
|
40 | — | — | — |
|
CAAATATACGACATAATTGTTAGCTAAGTAAACAAGCACT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:9500046c69e3
|
40 | — | — | — |
|
CTTAATTAACTTTGAGCACGTTGCCCTGTTGACATATTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:b0567de39f75
|
40 | — | — | — |
|
CTTATGTCAATATTGACGTACTCGGGATGATTAAATTACA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:cf6a915440ea
|
40 | — | — | — |
|
CCGAATTAATTACACGTGTATACGCTGCATTCAATGTTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:85711997b373
|
40 | — | — | — |
|
ACTATGCAAACAATACAATACAATATCCTAATTCATTAAC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:c6bbb8bd3c56
|
40 | — | — | — |
|
TACTCCGATTAATTGCTTTCGTGGCAGCTTGCATTGTGTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:6cca9744de45
|
40 | — | — | — |
|
AGATAATTGGCTTATGTAAACACGAGATCGTATTACGTTT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:8e41f2a71a95
|
40 | — | — | — |
|
TTAATTAAGGTACAACAACGTTGTTGACTTAATGAAGCCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ea66630f03ee
|
40 | — | — | — |
|
TGCAATAACTAATTAGCATAACACCACATTGTGTTATTGA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:2a6d1ecab64f
|
40 | — | — | — |
|
CACGGCATAGTTACGACCTCGGTAATTAATTCGTAATTCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:b64327ee8024
|
40 | — | — | — |
|
GAATCGTTAATTACATGATTACATTGACCTGTTATGTTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:fe06f6f953a7
|
40 | — | — | — |
|
CTTGGTCGCACGCACTAATTAAATAACGGCACTGCGTTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:e3ad6aa60199
|
40 | — | — | — |
|
TAATTAATACCGCTGCTATTACGTGTGTTTACTTAGCAAG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:0c8475bca321
|
40 | — | — | — |
|
TGCATTAGCGCTAATTACCTAGCATTCAAACAGACGTAAA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:d97e8b7cba03
|
40 | — | — | — |
|
AAGTCGATACTCAATTAATTGCGTTAGGTAAACACTACCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ae24bba8b32d
|
40 | — | — | — |
|
ACTATCCCTGTAATTACACTCCACGTAATTACGTTGCTGT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:1d074af0d9fc
|
40 | — | — | — |
|
AATGTCAATATTGACTTAGTAATTACTGAGAAGAGTTATG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:3268bfe05129
|
40 | — | — | — |
|
ATGTAAATATTTACACAATGCTACGTGCGATTAATTACTT
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ea8b75d44296
|
40 | — | — | — |
|
CGCAATGCGCGCTAGACTACTGAAGCTGTTAATTACGCAG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ebf9a81264fd
|
40 | — | — | — |
|
ACTAATGTCAATATTGACCGATACATTACCAAACTAATTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:c0531c5b1ecd
|
40 | — | — | — |
|
GTAAACAAACACTATATTTGCATACGAATGTAATTACGTG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:004cc4851b6e
|
40 | — | — | — |
|
AGCACATCATTAATGGTTTGCGCACCGGGGTCATTATTGA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:4b4b9ff424e5
|
40 | — | — | — |
|
CCTGCCACCGTTCAATAGATGTAATTAAGCACCGTGTTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:69a92d00d150
|
40 | — | — | — |
|
GTGTTCGTGTACACGATAATTGATTATGTCACTCTGTTTG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:ed066af06935
|
40 | — | — | — |
|
TATCCCGTTAATTACATACGCTCCTTGTAATTACACATCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:a87a91c2604e
|
40 | — | — | — |
|
GCAGGAATAATTAACGTTGCGCAAATTAATCGTTGTTGAC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:3805e442f3ab
|
40 | — | — | — |
|
GACTAATTAGCTATTGCAACGCTAACATTAGTCAGTGTGC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:c3d2fe5289ca
|
40 | — | — | — |
|
GAACCGTCCTCTGTATTTACCCACCTAATTACATTATGCA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:489722fab733
|
40 | — | — | — |
|
ATTAATTAATGCGTGTCGTACGGCGATTACCATGACCGGG
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:0e66f08bbbcd
|
40 | — | — | — |
|
TCTGTTGACAGATCACCTAATTACGAAACTTACTCGTTTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:88517798ff5e
|
40 | — | — | — |
|
CATGTCACCCTGTCCTAATTAGAGTGTTTACATAACGAAC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:36629c8eae7a
|
40 | — | — | — |
|
ATGTAATTACGGTGAATCCACACCTTAATTACACCTCACC
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:6b458137e0bc
|
40 | — | — | — |
|
CTTTGTGCCCTCTTTCCTGAGCGATCAGATTCGTTAAGTA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:753ea79ef295
|
40 | — | — | — |
|
AATATTATAGAGTGGAAGAGTTGTCGCCAATCTCCTCTGA
PANAPTA:P55317:FOXA1_LMX1B:PRJEB66722:R3:a9b3e234a97a
|
40 | — | — | — |
SELEX rounds
R3 ·final