FOXA1_PAX5
CAP-SELEX sample PAX5_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TACTTAGTCACAGTCGGCTGATCTCTGCAAATACACGACT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:27094a9a3cd5
|
40 | — | — | — |
|
TACATAGTTACGCATGAATAGTCCACGCCACGTTAAACAG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:26c797f9001f
|
40 | — | — | — |
|
GACATAGTCACGCATGACCGCTCAGCATTTGACCTTCGCC
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:bd7f8a2d44c7
|
40 | — | — | — |
|
TACTTAGTCACGCCTCATTGCGTACTGCCACTCTACTAGT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e6c1540f3328
|
40 | — | — | — |
|
TGGTTAAACTAGTCAGCTGTGACTAAGCAAACAAATGGAA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:0bb7d25738b6
|
40 | — | — | — |
|
GACATAGTCACGCACCGATGCACACACACATGCACGGACC
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:fe796dd4ab88
|
40 | — | — | — |
|
GCTGCCCAGTCAACCGTGACTGAGTAAACACAAGGCTGCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:601937bdd9df
|
40 | — | — | — |
|
TACTTAGTCACGCTTGAACGTCTAACACGTTGTAAATACA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:52cbeaa72282
|
40 | — | — | — |
|
GACATAGTCACGCCCCATCGGTTGCGTTACTCATCACTGG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e376e4adec41
|
40 | — | — | — |
|
TACACAGTTCCGCATGGACGCGTGTGACAAGTAACCCCCA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:2a1a33a3e8a2
|
40 | — | — | — |
|
TAACCACCCTCTCGTCACATGAGGCACCTCCCCGGAGTGT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:d4eea86152f9
|
40 | — | — | — |
|
TACACAGTCACGCACCGTTGCTTGCCCTCCCCCGTGATAG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:b1b0a3acb9b1
|
40 | — | — | — |
|
TACATAGTCACGCCTCACTTATTTCACCCGCAGCCGTGCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e01e56dbbbe2
|
40 | — | — | — |
|
GACATAGTAACGCATCATCGCTCCTCGAAGCCTCGTCCTA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:73852cc01376
|
40 | — | — | — |
|
GACAAGCGTGCAATACAGTATTTGTACAGTCACGGTTCAG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:66a93b5e8750
|
40 | — | — | — |
|
GACATAGTCGCGCATCGACGATCAGTAGACCAACGCGTGA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:bb6ac8a98e63
|
40 | — | — | — |
|
TGCTTAGTCACGCCCCATCGCCCGCATAGTGCTGCGGAAT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:7a505834e2e3
|
40 | — | — | — |
|
TGCTTATTCGGTGATCCGTGACTAGGTATACAATGGCCAG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e7d17a377642
|
40 | — | — | — |
|
ACTTACCGAACCGGAACTATGTAAACACAACAGAACACCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:03535317d096
|
40 | — | — | — |
|
AGTAAGTTTGTTTGCATAGTTCCGCATCACTAACTCCGGG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:93f0516cd079
|
40 | — | — | — |
|
CATTAACCGTGCTAGTACTGTTTACATAGTCCCGCTTGAA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:30440856b8fa
|
40 | — | — | — |
|
TACATAGTCACGCACTAACGGTTGCACCAGCACACCTGCT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:7e2a32cb64f3
|
40 | — | — | — |
|
TGTTTAGTTCCGCTTGACCGATCCCGCGCTGTAGATAACA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:ebeacbd181cd
|
40 | — | — | — |
|
GGCATCACGAACACGTCGTCACGCCGCGCGTACCGACAGA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e2d48a718b61
|
40 | — | — | — |
|
GACTTAGTCACGCATCCCTTCACAGCACTTCCCCTACTGT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:360ee81e42ef
|
40 | — | — | — |
|
GACTTAGTCATGCACCACTAGCCGCCAAGCACGCACCTCA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e7864016e3c5
|
40 | — | — | — |
|
GCTTAATATCCACTCATGCATGACTAAACAAACAACTATT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:b2313c4f374a
|
40 | — | — | — |
|
TACTTAGTCACGCTCCGATCACTTCAGTAATACCAAGATA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:479df9d901b0
|
40 | — | — | — |
|
GACACAGTTCCGCATCGACAGGCTCAAGTGAGCCGTGTAA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:a5bf6860b62c
|
40 | — | — | — |
|
TGCATAGTCACGCTTCGCCACCCCGATGTGACTGCTTCTT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:de0e5c163db5
|
40 | — | — | — |
|
TGCTCTCCAGCCACTGATGCGTAACTATGCAAATAGTATG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:8f641a6d25c2
|
40 | — | — | — |
|
GACTTAGTCACAGTCCAACGAGTGCGGCTCGGCCCGCCCA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:f5c2d3ecdeaf
|
40 | — | — | — |
|
TACATAGTCACGGAAGACTACACACCTTGTATTCAGCCCA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:9d38345c7d99
|
40 | — | — | — |
|
TACTTAGTCATGGATGAACGAGCTCGAAATCGCAGTGTCA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:c69ac98cbc68
|
40 | — | — | — |
|
TGCTTAGTTCCGCTTGAGCAACGTTCAACAGCGATAGGCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:0af8a0b2cec5
|
40 | — | — | — |
|
GACTTAGTTCCGCTCCTATGCGTCGGGAGTTACTTAGGTG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:65cf0a55b201
|
40 | — | — | — |
|
GTAAGTGCCATCATTGCTTGTTTGTTTAGTCACACCTGAT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:f1693c697f05
|
40 | — | — | — |
|
GACATAGTCGCGCCTGGCTGACCATCCTTGACCGGATGAT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:c5af597d514e
|
40 | — | — | — |
|
CACCCAATGCACTCATCCGGCACTAAGTAAACACACACAA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:7df7614e08aa
|
40 | — | — | — |
|
CGCCCGTGATATACCACACACACCTCCACCACCGAGTGAC
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:84747c2f4b65
|
40 | — | — | — |
|
GACACAGTCACGCTTCCCTGCTCCCCGACAACCGATACCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:11c29be20522
|
40 | — | — | — |
|
TGTATGCCACTGAGGCGTAACTAAACAAACAGTACCCTCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:d977d5c84251
|
40 | — | — | — |
|
GACTTAGTTACGCTCGACCGCTATCGTGTGCAGCTGCCTC
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:f125cfaf5991
|
40 | — | — | — |
|
TGCACAGTCACGCATCATGAGTTCGAATCTCGCCTTCTCG
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:e7b311be9770
|
40 | — | — | — |
|
TGCTCAACGATACTATGTAAACACAAACGTTACGCATCGA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:0980499c5e68
|
40 | — | — | — |
|
TACACAGTTACGCATGAACGAACTTCATATGCTGTATAGT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:23f01d1c826c
|
40 | — | — | — |
|
TACATAGTCACCCTTCAATGAACGCAGGTACTTCTCGCCC
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:4d50dce609d5
|
40 | — | — | — |
|
GACATAGGCACGCTCCACCGAACAAGGACGCCCTTTAACA
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:505d6968fdf2
|
40 | — | — | — |
|
TACATAGTCACGGTTCGTGCAACATAGATCTCCCTGCCAT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:4b91b00c37e4
|
40 | — | — | — |
|
GTTTACACAACACGATTCGCCACTCAACGTTACGCTCCAT
PANAPTA:P55317:FOXA1_PAX5:PRJEB66722:R3:58111d5eef0b
|
40 | — | — | — |
SELEX rounds
R3 ·final