FOXA1_POU1F1
CAP-SELEX sample POU1F1_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TGACAATTCATATGCACGTATTGCACATAAATAGGTTCGT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:1923edebb7e7
|
40 | — | — | — |
|
CGCAGGTAGCAACAAGTAAATGTAACAGCATTAAAAGCCG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:ab3c00ad533a
|
40 | — | — | — |
|
GGATAGCAAAAATCAGTGGCTTTACCAGTCCAACCCTGCG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:e68c8a615b47
|
40 | — | — | — |
|
CGCCGCTGGCTTCACACCTTTTCTCCGTCACCTGTCGGCT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:38fa7142a46f
|
40 | — | — | — |
|
AAACACAAACATTCCCCTTGCATTATGCAAACAACACAGG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:9d954f32c487
|
40 | — | — | — |
|
AAATATGAATACTTTCCGTTCCTTGTTTGCTATCTCCGTG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:eeaa5ad803f4
|
40 | — | — | — |
|
CGAGTTGCGATACACGGAAACGTGCTAATCTTACTATGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:1a041d2e3f64
|
40 | — | — | — |
|
CGACTCACATTCTATGCATCCGCTGGTACATCCATACGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:01936c9a1507
|
40 | — | — | — |
|
GGCGTTCTGCATATAGCACGGAGTGGCTACATACAAATCT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:012096cdc758
|
40 | — | — | — |
|
ACAGTGAATGGTACATATATCCTCTTGGAAAACATATACC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:f534279d8ae7
|
40 | — | — | — |
|
TTGTTTACCTAATGTGCCGGATGCTAATTAACATTATGTC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:a4f274e7c89a
|
40 | — | — | — |
|
CTTAACGGCGTAACATAAACATTGTATATATTCGCACGAG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:afd1e682e1a7
|
40 | — | — | — |
|
CCACCATAAACTTGTTGAAACACGATTCATAGTGGAGTAC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:651cf8373ed0
|
40 | — | — | — |
|
CCCACTAGCCCTGTGTCGCTACTAAGCGTCGCGCGGATTA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:3182417b03cf
|
40 | — | — | — |
|
ATGTAAGCATCGCCTAATGGCTTCGATTTAATGATATGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:b4f8b1a10e38
|
40 | — | — | — |
|
AGCTACCTCATAATGAAGCATGTTTACACAACACTAAGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:d0e6a18c3264
|
40 | — | — | — |
|
AAAGTAAACAACGACTGCATCCACGTGCATAATTAACGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:f1dded856fbe
|
40 | — | — | — |
|
AAAATGCATTATCGCAACTAATGGTGTAGAACTATGGTGT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:d936c39a963d
|
40 | — | — | — |
|
ACCACAATGTTTAGATACGCTGCATAACATTAACAGTGTC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:ea253982763c
|
40 | — | — | — |
|
GCGTGTCCGTAACCGACAACATCAATATTTACACAGTAGG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:a7299b784c2d
|
40 | — | — | — |
|
AGACCCGACCCACCGCCACGACCTGCTGACCATCTCCCAC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:62d23fa8e2d5
|
40 | — | — | — |
|
AAGCCGAATCACAATTTCACACCTCACCCCGTCACCTCGA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:a69bbea5ef45
|
40 | — | — | — |
|
ATATGCTAATATATTTCACCTCCCCCCAGCGTGTTATGTA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:2571c8ae4b90
|
40 | — | — | — |
|
GAAACCGCAAACGTGTTATGCAAATAAAGTAAGGACTTCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:7488884d9a1e
|
40 | — | — | — |
|
GCGGTCTCATGATGTTTACTTATGCAAATTTGCCTGAGTA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:604885e491ae
|
40 | — | — | — |
|
ACGGAAATTTACGTTAAATCGTGCTAATTATACTGTACAC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:83d8d0dea262
|
40 | — | — | — |
|
TTGACTATTCATATAAACAAACAATATGTTTACATAAATA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:9c0890a51c37
|
40 | — | — | — |
|
CGATTTACATAAGCTAAAAGCGGCATTGTGTACTTGTGTA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:5c9a4a9b9107
|
40 | — | — | — |
|
GAGGCTACGCTACCGTGCGGTATGAATAATACATATGCAC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:04910d50a5b7
|
40 | — | — | — |
|
TACGATCACTCACATTATCACACCTCACCTGCCATGCATC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:409165a18ba5
|
40 | — | — | — |
|
GCCATATAACATGCGTGACATAGCGCTGAGAATCGATAGT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:d99ee333ff72
|
40 | — | — | — |
|
GACTAGTAGGACGCATCCACCATTCTCATTTGCCTACGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:68b4dd4b6e04
|
40 | — | — | — |
|
TGTCACGTAACAATGTATGCACACCCAGTATTCATGAGTC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:02ad27b6e1f1
|
40 | — | — | — |
|
ACAGTCAACAATGGTGGCAAACATTACGCATAACTATGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:e85ff168ae8c
|
40 | — | — | — |
|
AACATACACTCACGCACAAAGCGTGTAGTGCATATACCGT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:c8cc4203bd2c
|
40 | — | — | — |
|
TTGTGCTCGTACTTGAGGTGCTAAAATGAGCAAACATGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:522c4e617aa2
|
40 | — | — | — |
|
AGCGCTTTAACGTCACGCAAGACCCTAGAACTACCTCATG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:236b3ddb4b0b
|
40 | — | — | — |
|
AAGCCATTCCCCATACGTCACAACACCTGCCGTCCTCATG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:0fea322bbca1
|
40 | — | — | — |
|
TGTCTATGCGCTACAATACTAATATTTACATAATCGGAGC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:0966be6d5e99
|
40 | — | — | — |
|
CTAAATAAACATAAGCTGTAGAGCACTGACGGGTGGTCCT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:5978857ab15e
|
40 | — | — | — |
|
CGTGTAATCACCTGCTCCACGCCGTTTGCGCACTTATGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:d4544335ec78
|
40 | — | — | — |
|
TTGCATTTCCATAAACAAACACAGGATCCGCAAGTGTGTC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:d224492634e6
|
40 | — | — | — |
|
TTAGGCTACGCATATAATTTGTTCTGCTGCCTATGTAAAC
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:a86364a33739
|
40 | — | — | — |
|
TCGTCCTCCTCAAGGCCTGTTCGCGCCTCGAATCACCACA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:ec2c1438550f
|
40 | — | — | — |
|
CATAAACAAACAAAGAATGACATTGCAGGATGTTTACACA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:3fa00365239f
|
40 | — | — | — |
|
TCGCCCGCGACTGCGCATCGCTATTTACGTAAAGCTCATG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:1ec06a9041ed
|
40 | — | — | — |
|
TTACCCTCCTATTAGCATGCGCACCAATCTCCCTCACATG
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:18ab7f6b1a29
|
40 | — | — | — |
|
AAACCCTGGGAATATGCAATGTTGGCTACTTACATACGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:3ec07f07c3db
|
40 | — | — | — |
|
CACCAAGGCCCTTCTACACCACTCTGCGTCAAGCTGCGCA
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:c8626a009b6d
|
40 | — | — | — |
|
CAGTTTATGTAATGAGCGTATGCAGACAATGATTACTAAT
PANAPTA:P55317:FOXA1_POU1F1:PRJEB66722:R3:36e32f6724e7
|
40 | — | — | — |
SELEX rounds
R3 ·final