FOXA1_PROP1
CAP-SELEX sample PROP1_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AGGCACACACGATGCCCGTGAATCTACGGCTGTATGTTGG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:0936d0bf1367
|
40 | — | — | — |
|
AATGCAATTAGCTGCCGAACGCCATGGGTCAATATTGACA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:25c53c513d71
|
40 | — | — | — |
|
CCTGGCTGTAGCACCACCTACCGACGCACGCGTACTGAAA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:e966e8f9583c
|
40 | — | — | — |
|
CACACATTCAACATATCGCAACGATAAGACTTTAGAAATG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:3261f8a0c183
|
40 | — | — | — |
|
CCACGTTGCCGCGTTGAGACTGCCACTTAGCTACCTATAT
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:7136d01618bd
|
40 | — | — | — |
|
CCAGCTCCAATCCCCTCTTCGCCACGGAATTTACTACTTG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:887b0a793f6b
|
40 | — | — | — |
|
CGCCAACGCCGCTCGACCTCGTCACCTCCAGCACGCTCCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:6b2c755c584b
|
40 | — | — | — |
|
GTGTACTTAGTCCCACAATGTCAACATGTTAAGTTGATTA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:e517cf62d6f4
|
40 | — | — | — |
|
CCCACTTGATTCCTATTCCATACAAACAACCAATATGCGC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:f2ac3b3f20c2
|
40 | — | — | — |
|
GTGCCCCGCAAATGCATTATGTCCACTCCTAACCCTTGCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:6d834f08b237
|
40 | — | — | — |
|
CCATCACCACGTCCACAAGCCCATTTACTTGCCCCTCCAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:107a096164a5
|
40 | — | — | — |
|
CCGCCTACAACCCCCGCAAGCTGCAGCGCCCAACGGACCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:24ed5df7cd6f
|
40 | — | — | — |
|
AGGGGTGGCAACTGTATGGATAAAAGCTGCTAGTGCTTCG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:d9089d108247
|
40 | — | — | — |
|
CCAATATCGCGTTCTCTGTGTAACCTTCCCGTCACCCTCC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:04952726373f
|
40 | — | — | — |
|
CCCACGGTTTATCCGATCCACCATCCCACACTGCTCACAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:4e89cd15df60
|
40 | — | — | — |
|
TTCATGCGGTAGTAATCACATTAGTTATGTAAACACGTTC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:7175547c3cc6
|
40 | — | — | — |
|
TGCGCTTCCGTCAGTTAACACCCATACATATGCCGCCCCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:41082e6098e6
|
40 | — | — | — |
|
GTTTGCACATCGTAATTACTTGAATTATGCCGCGTTTACA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:d8e60ca8af54
|
40 | — | — | — |
|
GGCCTAACCGCTACCTACCCTTTTTTCAGGACCTATTGCC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:7607a6e81ba4
|
40 | — | — | — |
|
TCACATCCCCATTCATTGAGCTTCTACCGCTTGCAACTTC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:2d57d5028eae
|
40 | — | — | — |
|
ATGCAAATATGGTAATCAAATTACTCGTAAGCAAAATACA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:e16e6e27dd97
|
40 | — | — | — |
|
TGCCGTTACACCCCGCCCTTCCTCCATGCCATAGCCACCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:b99e6f82dee1
|
40 | — | — | — |
|
AACGCCACTCACGCCTCCCGCCACCACACTCACGCCATTC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:3173f60f8a1f
|
40 | — | — | — |
|
ACCACCACCCTCCCCACCACACCAACTGGCGTAACAATGC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:47baedf8581a
|
40 | — | — | — |
|
GATTCAATTACGGGCTAGCCCAATGTTTACGTTGGGACAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:08f7dc77980b
|
40 | — | — | — |
|
CGCTCACTATTTTCATCCTGTGCGACCAGCCTCCGCCTCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:cf50134fa4a7
|
40 | — | — | — |
|
ACCTGCAACTGTGCTCGCTCCCCCTACCGTCACTCCGCGC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:94512f3a241d
|
40 | — | — | — |
|
CGACTGCTTACCCCGTATCACAGTACTACATCGCCCCACC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:df84786bf9ff
|
40 | — | — | — |
|
CCGCATCCTTTCTAACCACAGACAGCGTTAACCTCATTAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:610a02ac1470
|
40 | — | — | — |
|
TACTAATCTGATTGGTAAATCCAATCAGCATTAGCTCGCG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:1054ebd4ac0b
|
40 | — | — | — |
|
GCCGTACTTACCACCCTTGCCCTAACCACTGCTCCCACCA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:48c2c5795db4
|
40 | — | — | — |
|
GCTCGCACACCCCATAACCACGCGACAATATCAGCTCACG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:0f5235d78db7
|
40 | — | — | — |
|
CCACCCAAACCTAATTATGCGTGATACCTTTGTTTACCAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:ebbd5482834d
|
40 | — | — | — |
|
CTCCAGAACCCCTTTACGGTAACCCATTGCCAATACCTTC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:93398cadd40b
|
40 | — | — | — |
|
TTGATGCACTTGGTGCCTAACCCTAGATTAAACATGATGC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:0b84e092494a
|
40 | — | — | — |
|
CCCCCACGCCGCCCCCGTGCTTCACTGTGAGCACACACAC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:eea61d4be559
|
40 | — | — | — |
|
TGCCTCACCTCCCCCTCATTTGTGCCACCCTCAAAGTAGG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:e6f2ff2a6e33
|
40 | — | — | — |
|
GTGTAAATACACGTTATTAATCGCATTACATAGTTCACTT
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:b9f27f332a49
|
40 | — | — | — |
|
GCGACGACCCCTTTTCCCGTCTCCGCGCTACCTTCTCACG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:7cf43ef03d17
|
40 | — | — | — |
|
TGACGATATAACTTAATTGGCTTAGCTGTGTAAATATTGA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:8cd6163bf66d
|
40 | — | — | — |
|
TCCTGTATACCCTTACCCCTAGGTATGTTAAGCAGCGCCG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:d81976a4278d
|
40 | — | — | — |
|
CATAATGAGATTATGCATCCCCCAAAGTAAACACGCTTTA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:f58cc0359d54
|
40 | — | — | — |
|
CGCGCACGGTTAACCCATCCCCTTCCCTGCTACTCGCTCC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:7b40de882f3c
|
40 | — | — | — |
|
CCGCACAGCGTAACCAAATTCAATTACGACGACAAACATG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:b759c3cffd9f
|
40 | — | — | — |
|
GGACGTTCCGTTGACCTAACCGATATTGACCTCGCCCATA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:81124a54e225
|
40 | — | — | — |
|
CCTAGCTAATCGTTCATCACCAACAACCACGCCGCCCCTC
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:4812fb014674
|
40 | — | — | — |
|
GCCGTACCTAGAAACACATCGGGGGGGCATGTCCGATACG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:c665f189b652
|
40 | — | — | — |
|
GTATCGCACGCATAATCGAATGAGTAATGTAAACAACACT
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:fc24dedc5899
|
40 | — | — | — |
|
GTCCATCCACAATGACTAATACGATTACGCAATACTGGTG
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:ab8c79f052bf
|
40 | — | — | — |
|
TGTTTGCGTTACGTTCAAATTTAATTGCCGTAAGTAAACA
PANAPTA:P55317:FOXA1_PROP1:PRJEB66722:R3:c423afff99e0
|
40 | — | — | — |
SELEX rounds
R3 ·final