FOXA1_SOX18
CAP-SELEX sample SOX18_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GGCTGGTGATCAAACACAACACGCGGCCAGGTTTGAACAC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:302c3b420a78
|
40 | — | — | — |
|
AGGAACAATACCATTGTTCCATGGTAGCGAACCATGCCCT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:e2966e6e4c88
|
40 | — | — | — |
|
GGAGTAAACAATGTTATTGTTTATTGGTGTAGTAATGCAT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:b423ef130c23
|
40 | — | — | — |
|
TGTCGTGGCCATGATAACCGAATACAATGGTATTGTATTA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:450d1f1d55d3
|
40 | — | — | — |
|
CAAAACAATGTCATTGTTTTCCGCCTTAGAGGGAAGCTGA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:5498d4d0d7dd
|
40 | — | — | — |
|
CGGACGAAGCGTTAGTCAGCTAAACAATCTGATTGTTTGA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:d0be5d9e666c
|
40 | — | — | — |
|
AGGTCATGAATGGCATTCATGGGGGACAGGAGAGAGCGAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:9294f8e9afd4
|
40 | — | — | — |
|
AATCCGCCATTAACACAATGCAATTGTGTTGAACACGATT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:c53fa1ed7bcb
|
40 | — | — | — |
|
AACCGCTCGACGCGCCTGCGGACCAACAATGACATTGTTG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:5b3b1cc52de3
|
40 | — | — | — |
|
GCCCATGAGGCATCGACAATAACATTGTCGTAACGTTCAT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:c419d1c8807c
|
40 | — | — | — |
|
CACCAACGGATACACTAGAAAACGAACAATGCTATTGTTC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:7b22b203b7d2
|
40 | — | — | — |
|
AGAGCACACAATTACATTGTGTTTGGTACTGCACAAGGCC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:10bb5be382f0
|
40 | — | — | — |
|
GAAGGTGCTACAATTCCATTGTAGCGTAACACAGCATCAC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:34388adf1f73
|
40 | — | — | — |
|
CACTCAGGATCGACGACCAACCAAACAATGTCATTGTTTA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:7b0ca2da6f92
|
40 | — | — | — |
|
CACAGCGAGCTAGTGTGATAGCACAATGTCCATTGTGCAT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:4155c6f83254
|
40 | — | — | — |
|
TACACCATGCCGTGCGCACGAAATCCCAAGCGTCTGCTAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:36d1a20e0797
|
40 | — | — | — |
|
AACAAGTAGCTATGCTATGTACGACAATTGCATTGTTGTC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:268b09d6b92b
|
40 | — | — | — |
|
AGCCCAAACAATGTTATTGTTTACCCGCGTAACATACGCG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:69f7e3b14fbc
|
40 | — | — | — |
|
GGTGAACAATGTCATTGTTCAGGCATTATGAGCTCTTGCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:24247bff2d6d
|
40 | — | — | — |
|
CCATACATTGAACAATAACAATTGTTCAGTACCACAGTGT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:20907aeb6b25
|
40 | — | — | — |
|
ACCCCGATTGGGAACAATGACATTGTTCCTAGGCAACATG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:a82f00a265dc
|
40 | — | — | — |
|
ATGCAACAACACAAGGCCATGAATAACATTCATCCGCACG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:b200d86a5ada
|
40 | — | — | — |
|
ATATTCAAGGCGCATATAAGCAAAGCTTGCTGACATACGC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:772d7f980626
|
40 | — | — | — |
|
GAAACAATTGCATTGTTATCCTAGCATAACCCATGACTCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:ea41a3b07639
|
40 | — | — | — |
|
TATCCCGCCATACTCCCCGAACAATGCCATTGTTCACTCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:85d5571d349f
|
40 | — | — | — |
|
TCCCAATAACAATACCATTGTTCGTCCCTCACGCTCCACA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:1161d75d2cbd
|
40 | — | — | — |
|
ACTGCAGGAGATGTTACAGGGACACAATTACATTGTGCTA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:bb8b262408fc
|
40 | — | — | — |
|
GGACATAACACAATTGCATTGTGTGCGTTAATACCTTGTC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:49f94993e7c3
|
40 | — | — | — |
|
ACATGCTTATAACACATGAATTGCATTCATGGCGACCCCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:d1e4be762759
|
40 | — | — | — |
|
CGGTCCAGGGTATAACAATGTTATTGTTATCGTAATCGTA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:dc9802febe07
|
40 | — | — | — |
|
CAGGTTCAGCACAATGTTATTGTGTCCAATGAACTGTGAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:0c0d2b6dd6d6
|
40 | — | — | — |
|
AACAATATGCATTGTTACATTAGGGAAGATTAAGACATAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:fd6495b6b220
|
40 | — | — | — |
|
CGCAGAACAATGTTATTGTTGCACTGGGTTAGAGAACACA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:017cd478f0ea
|
40 | — | — | — |
|
ACGGGGTCTGACAATACCATTGTCAAACGGTTCACGTGAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:4a23c794f8b8
|
40 | — | — | — |
|
GAAGAAGAGATCAAAAAGAACAATGCACATTGTTCAACAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:46f70574a334
|
40 | — | — | — |
|
CCTAGCAAATGAATAGCAGACACACAATAACATTGTGTAG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:910a2dfbbf3d
|
40 | — | — | — |
|
GCCAGTAGGCGCTCAAGGAACAATTGTATTGTTCACAGAT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:5f3674420424
|
40 | — | — | — |
|
GCTTAGGTGAATGTTATTCACGCTAACGACCCTCAACCCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:85679640d6c0
|
40 | — | — | — |
|
GAACAATAATATTGTTCAAGCAGTGAGCTAACGGCAACAG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:c69fbd589bb3
|
40 | — | — | — |
|
ACCTCAACAATAGCATTGTTCGCTTTTCTGTACGCTCCAG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:2f8699c8be3e
|
40 | — | — | — |
|
GCAAAAAATCACAATTATTGGATTAGATTCGTCAAGCCGA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:a8392e81066c
|
40 | — | — | — |
|
TTCGTGTACACAACTTGACAATAACATTGTCATGATCCAA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:9d868e3a7306
|
40 | — | — | — |
|
GACACCAACACTGGAACGCAATGTCAATATTTACATTAGG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:e9b9c4a63abd
|
40 | — | — | — |
|
GAAGAGATGAATTCCATTCATGGTGACGACTGAATGACAC
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:6b6c3e647839
|
40 | — | — | — |
|
GGAGGATCCTATCAGGCTGAGAAACAATTTCATTGTTTGT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:7426f44c22de
|
40 | — | — | — |
|
ATGGCGCGTATGCTGAGGCACAATCTGCAGTGTGCCAATG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:256b56b4b6bd
|
40 | — | — | — |
|
ATATGACAATGTTATTGTCATCTTTCTGTAGCAGAGCGTA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:14c5602afaf0
|
40 | — | — | — |
|
TATGTGCATATACACTAGACGGAGTGTTACATACACACAT
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:006ef7853f3c
|
40 | — | — | — |
|
GTAGCGTGACAATTGCATTGTCCCTGAGCTAGACCTCTAG
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:ce9ed3e9a19e
|
40 | — | — | — |
|
CATAACCCAACAATGTCATTGTTGCACGACACAGACGCCA
PANAPTA:P55317:FOXA1_SOX18:PRJEB66722:R3:93e137714d1e
|
40 | — | — | — |
SELEX rounds
R3 ·final