FOXA1_TCF12
CAP-SELEX sample TCF12_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCATGCATAAACCAGGTTGCTAGATAGTTCATACATGTGA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:55c158d37991
|
40 | — | — | — |
|
AAGTAATGACATACATTTTGCGCGAAAAGTGCATATCATG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:29dffb3a748f
|
40 | — | — | — |
|
AATGTTAGCAGTTCATACACAGGCATGGTGCATAAACAGA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:caa85f10cf4d
|
40 | — | — | — |
|
GGGCTGCAAGTTCATACACACACTCGTGTGCATAAATTGT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:c9e548e6aec1
|
40 | — | — | — |
|
GTTAGTAGTGTCATACATTCATGTTTGCATGCATAAAACA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:b1b42c1b4f8b
|
40 | — | — | — |
|
GCAATAGTAATATAGTACATACTTTCGGTGTGAAAGCATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:05d540ab7ac0
|
40 | — | — | — |
|
GAGCCATTATCATATACACATAGACTGTGTACATAATATT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:afff066f9395
|
40 | — | — | — |
|
TTGTCTATTAGTTCATACAAAAAGAATTCTTGCATAAACT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:7f843941dbb5
|
40 | — | — | — |
|
TGGGGTTTCATATACAAATGTTCATTGGTACATACAACTG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:b99d9c61cc28
|
40 | — | — | — |
|
CTAATATTCATACATGTGATAACAAGCATAAATATTCCAC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:553733542cf2
|
40 | — | — | — |
|
ACTAACAGTGCATATAAGCTGGTAACACTAACATACACTT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:b9c3c38a4e2a
|
40 | — | — | — |
|
AAAGGTTCATACATCCGAGTACGATGCATAAACCGAGATG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:58845f67b33a
|
40 | — | — | — |
|
GCGAGTATGGTACATAAATATGGGTCGTGACATATTCATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:cd611662b60f
|
40 | — | — | — |
|
TAGTTACGAAACATAGCATTTAAAAAATAGCCATATATCG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:8319fdf55746
|
40 | — | — | — |
|
AGCACATATAAGCATAGCAGCTGCTAACATATGCTGACAA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:3835c34f0f99
|
40 | — | — | — |
|
TTAGTACATATACAATACGTTAGGCAACACATTATACATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:d4c4a8661b3b
|
40 | — | — | — |
|
TTGTGTACTACATACATAAGTGTTTATGCATATAGCTGTG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:a93f9ae5bc0b
|
40 | — | — | — |
|
GAGAGTAAAAGTACATATAATCGAAGGTGAGAATTACATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:93e114c72f5e
|
40 | — | — | — |
|
CGGGGGAGCCATACACATTAATATGATGCATAGCGTTTAC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:94f930ab9bcd
|
40 | — | — | — |
|
GACAGGTGCACCACTGCGCTCGACGCACCTGTATCGCAAC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:3bf0bd80cac7
|
40 | — | — | — |
|
ATCCTATAATTCATATGCATGGTACAGTGAACATAAATTG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:6c66b46fe1ac
|
40 | — | — | — |
|
CGACGTGTGACGCGTACTAACATCGTTATGATGTTGCTAC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:8453d7a1567e
|
40 | — | — | — |
|
AGTCGAGAGTACATAAAGCGATAAACGCGTCATATACCTC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:b8cc9b827f52
|
40 | — | — | — |
|
TCTTGCATATACTCACCCGTGTGAAGTACATACAATCATC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:d6c0498cfa37
|
40 | — | — | — |
|
GCATGTTAGAAGACATAAACTGAGTTAACAGTTCATATAT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:384033e6ba3b
|
40 | — | — | — |
|
ATGACATAAATTTATGGTATGGATAAAGTTCATATCATCA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:78d31421bc0e
|
40 | — | — | — |
|
GAGTGAACATACAACCATACAGAACATGATTGCATATTCA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:a4b3cd173744
|
40 | — | — | — |
|
CGCTAGCAGGTGCCAATGCCGTTAACGTAGCCACCTGCGA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:5a8c4d59642d
|
40 | — | — | — |
|
TTTGCATTATACATATACACTCATGCCCCGTGTACATATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:ba956960c8ee
|
40 | — | — | — |
|
TATGTAGTCCATAAACACAACATCACGGTTGGCGTTCATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:37c547df072a
|
40 | — | — | — |
|
TTGTTCATATGACGAAAGTTACATAAACAGGACTTCATCT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:196133af057b
|
40 | — | — | — |
|
GTGTGCATAAACTGACGCAGAGCAGTAATCATACACACTA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:e24d5eb0c7dc
|
40 | — | — | — |
|
GGCGGCTTTGTGCATATATTCCTTGGGACTACATAAACAA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:3b44be98a6e1
|
40 | — | — | — |
|
ATATGAACATATAACCTCCACCGGTGACATATTCAGTGTG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:19a700db1e69
|
40 | — | — | — |
|
GTCCCGCTAGCAGCTGTCAGCCAGGTGCTAGGGTGGACCT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:52e632ce5158
|
40 | — | — | — |
|
CCTTTTTGTATGTACATATAACGTTTTACATATACAATGT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:13dde2973953
|
40 | — | — | — |
|
TGTTTGTACATATAAACAATGTAAATTTGTTGACATATAC
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:4580d139d97d
|
40 | — | — | — |
|
ATATTGAGCATAAATCAAGATGTTTCATACACAATGCACA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:90a3594e0a3b
|
40 | — | — | — |
|
ATAGGAGAATACATATAAGTCGTGGCTTACATATGTTCAT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:2a354e7524c3
|
40 | — | — | — |
|
TCTGGATCTAGATACATATAGCAGAGTTGTACGCTACATA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:abb997024972
|
40 | — | — | — |
|
CGGATAAGAGCATAAAACTTTGTGAAAAGTGTCATACCTT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:a785dbfa6b68
|
40 | — | — | — |
|
AAGAGCATAAACTCGTTCACGAGCGTTCATACACTTTGGA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:8f0a4bdd03f5
|
40 | — | — | — |
|
TAATAGCACCTGCTTGCGTTAAGCTGACAGGTGCAGCGAA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:4a96419545d8
|
40 | — | — | — |
|
CCGTGTCCACCTGCCACATCCATGTCAGGTGTCGAGAGCG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:745ad613bbb1
|
40 | — | — | — |
|
GTGTTTTCATACACTACGTTTACCGAGGTGCATAAATACG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:83f35d74722b
|
40 | — | — | — |
|
CGTGAACATGCTGGTACATATAGTACTCCTACATATACCA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:d01ada791891
|
40 | — | — | — |
|
CTGTTTATGTAAAGCTTCATGCTCTATATGAACATTGCCA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:fbba47932faa
|
40 | — | — | — |
|
ACGCCTTCATACACTACATGCGGTAGAGCATAAAGGGACA
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:4c80cf68b371
|
40 | — | — | — |
|
GTCTTATAATAGCATATAACTGGTCAAAGTAACATACTAT
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:4581f1502a07
|
40 | — | — | — |
|
TCGCAGCTGCCACCGCTGTCCGCACCTGCGCTCAACAATG
PANAPTA:P55317:FOXA1_TCF12:PRJEB66722:R3:75a0076a7810
|
40 | — | — | — |
SELEX rounds
R3 ·final