FOXA1_TCF4
CAP-SELEX sample TCF4_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ATTAGGGAGCAAGACTCAAACACGCCCCACCAGAACTAAA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e628ceb2b699
|
40 | — | — | — |
|
CCCACGTGATGTAACCAGCCTTCACACGAAAGACCGAATG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:cd16f9feec68
|
40 | — | — | — |
|
CTAGATCTTCTTACTCGTCCCACCTCATATCACATGGAAT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:ab75bcd42dbd
|
40 | — | — | — |
|
AGGCAGGTGTAGGCGCACCTGCTAACGTGACAATGACTCG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:33a9e1bb876c
|
40 | — | — | — |
|
TCTCAGGAAGGTAGCAGGTGTTCGCCACACCTGCCTCGAT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:cc035b52bc2d
|
40 | — | — | — |
|
CGGCAGGTGCACCGTACACCTGCCTAGCCAACGCGAACTA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:aef0fa02ec77
|
40 | — | — | — |
|
ACCTTTCAACCAGGTGTTCCCACTCGGTGACACGTGGCCC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:aeb7f450035b
|
40 | — | — | — |
|
GCACCTGCCGTATCCCTCACGCATCCCTTCCGTCGACGGA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:f34db22d0689
|
40 | — | — | — |
|
CCAGCAACCGGTGTCCAGGTGCGCATCCTCACCTGGACCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:6dceb328daad
|
40 | — | — | — |
|
CCATGCAGATGCGAAAGATCGCACCTGCAGCCTGTGACTC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e8c6798f06f6
|
40 | — | — | — |
|
GACAGGTGTAGACATAAACGTACACCTGGCCGGTCAAGCT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:2638dfa70504
|
40 | — | — | — |
|
CTAACTGACACAGGTGATCTCCTGCACCTGTACCAGCAAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:f846b4871d03
|
40 | — | — | — |
|
CATCTTTGTCATATCTGCCTCTTTCACGCCCCCCAACCCC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:7a124827b086
|
40 | — | — | — |
|
GGCTCACATTCATACAACTTTCACAAATTGCATAAATGTA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:dbb414c6bdd7
|
40 | — | — | — |
|
CACCGAACCACAGTACTTTTAAACACGTTACTCAATAACA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e2f6d74257ad
|
40 | — | — | — |
|
CACCTGTTCGGGCCACAGGTGGTGGGATGGGCGGCATGGT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:12c6f28d6dbc
|
40 | — | — | — |
|
GCTCTGGCACCTGTTAGCTAAGCAGGTGCAAACCGCGCTT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e7641e6d9386
|
40 | — | — | — |
|
CTTCCCACAGGTGGACGACTCGCACCTGGGGGAGGACCAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:bc70b34e171e
|
40 | — | — | — |
|
CACCTTTTCGGCGCTATCATCCCCGTTACCCAACATCCCC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:22c2a6cfabac
|
40 | — | — | — |
|
GTCGACAGGTGCGCCTACCAGAGCACCTGTGCACTCAGAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:1fd6ce92105a
|
40 | — | — | — |
|
TTTCGCTTTGGGTGCAGCTGCATCCAATGAAGCAGGTGCT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:4ce32be1d8a9
|
40 | — | — | — |
|
CTACACTAAGCCAGATGTGCACGACACCTGGCCTCCACGG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:49edbe33de00
|
40 | — | — | — |
|
CGATCGCCTTGCTCTTTCCCAGCTCCACCTGCACCCAACC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:caf8b1a0fb7c
|
40 | — | — | — |
|
CTCCTGGTGTGCAGGTGCGGAGACACACCTGCGTGAACCC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:a8af77cda036
|
40 | — | — | — |
|
AGCACGATCCGGCCGCCAACCAACACACACGGAAGGTCCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:2278e70fd71a
|
40 | — | — | — |
|
GTCACGCATCTGTCAGCCAGGTGCGAATTAAATCGAGCGG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:c0803c7fd9aa
|
40 | — | — | — |
|
GTCCATTGATACACCTGGCGTCAAGCACCAGGTGCTGGAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e07ee3a72d0c
|
40 | — | — | — |
|
TAGCAGGTGCACCGAAGTGTACACCTGTCCGAACGTAAGC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:dadc1839d50b
|
40 | — | — | — |
|
TGTTGACCTCGCACCTGGTTCCTTCTGCACCAGGTGCGCC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:ab166fba0f9b
|
40 | — | — | — |
|
ATTGCGCGCACGTGCTGCTCTTGACACGTGAGTGCACACA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:e95b6d88aca5
|
40 | — | — | — |
|
GCTCAAACACTGCATGCACGTGTCATGACACGTAGCTTGA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:6328fa904814
|
40 | — | — | — |
|
TACCCCAACAACAGCAGGTGTCATACACCTGCTGACTGTG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:305faad16264
|
40 | — | — | — |
|
AGGCAGCGAGCGGAGAACACGTGGTGCTCACGTGGTCACG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:74475fdd0b7d
|
40 | — | — | — |
|
TTCGACTCGTGTCAGGTGCGCGTAGTTAGTGCACCTGCGC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:7fdc1e2511ab
|
40 | — | — | — |
|
CGCGCACTCTTACCCGCAGTCGATTCAACACCGTGTTTCT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:8fa13d6fbcd3
|
40 | — | — | — |
|
TCCGTCGCACCTGTGATATGTTCCAACTCATCCTTCGTAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:2bbea1a084cb
|
40 | — | — | — |
|
TACGATCATGTTGCAGGTGTCTTTCACACCTGCCTATGCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:d4281dd10f2b
|
40 | — | — | — |
|
GTAGCACAGGTGTGCGGAGTGCACACCTGCCCTCTTGTCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:c472cb901372
|
40 | — | — | — |
|
TGTGCAGGTGCAACACACCTGCGATCACAGTATGAACACA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:ed1cd4cf435e
|
40 | — | — | — |
|
ACGCAGGTGCGCGACTCATCCCGCACCTGCGCCTCGTCTC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:ce8a5069d7fe
|
40 | — | — | — |
|
TCATATGCACCTGCACCTAATAACGTGCAGGTGTACCGAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:2ddb3d9fe05b
|
40 | — | — | — |
|
GACGCAGCACAGGTGCTTCATCACCTGTGCGTGGATCCCG
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:59bfb2655f9d
|
40 | — | — | — |
|
TATTGCACCTGCGCATATTACACGACAGGTGCAATACAGA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:08a46a3d9405
|
40 | — | — | — |
|
CACCTGTTGCCTAACAGGTGGTCGCGCGCCAGCGTATTCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:45d263025ec5
|
40 | — | — | — |
|
TCCACCGCTATACTACGCCCGCTAGCCCCCCACCGTTGCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:2edd80f4a737
|
40 | — | — | — |
|
GTGGCCTCCACGCACCTGTGCATGATGTTAAGTAAACATT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:6dbce08b11de
|
40 | — | — | — |
|
ATGGCAGGTGTTCCACACCTGCGTTGACTCTTCCGGATAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:577076f60eb5
|
40 | — | — | — |
|
CAAGTTGTGCGCACCTGCTACGGCAGATGCTGTTCTAGGT
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:1d0051d35aca
|
40 | — | — | — |
|
TTCACCACCTGCTCCTTAACAGGTGCAACTGGCTGTACCA
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:4ca104c8d402
|
40 | — | — | — |
|
CCCGCCGTGCCCCGCGAGCACCTGCGCGACACAGCGCGAC
PANAPTA:P55317:FOXA1_TCF4:PRJEB66722:R3:15d1c4a2b579
|
40 | — | — | — |
SELEX rounds
R3 ·final