FOXA1_VAX1
CAP-SELEX sample VAX1_FOXA1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TGGCTACATACACATAGGAAAGTGCATATACCGGGAGATT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9d57f744c594
|
40 | — | — | — |
|
ATTATGTGCATATATCATAACCGTGCCAATACATACACAT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:6a3bfeabab01
|
40 | — | — | — |
|
TCCATTCATACACAGAACAGTAATTGTGCATAAATGAGTC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:cfbfcc2f391b
|
40 | — | — | — |
|
TGTACATCATATAATCAACGAGTGATGACATAAGTAGAAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:01ed385430bd
|
40 | — | — | — |
|
ATCACACCACAGCATATTCTCGGCGCGAGAACATACAGTG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:12a6f249ef72
|
40 | — | — | — |
|
CATTGGCGAACTACATATACTCACTTAGTACATATAGTGC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:94d913be08f4
|
40 | — | — | — |
|
AAAGATGCATATAACATACACCGGATGATTACATACACTA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:cedf4bd999f1
|
40 | — | — | — |
|
AGCTGCATAAACAATGTCGTAATTGGGTTCATACACCTAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:a5feb7aa30e3
|
40 | — | — | — |
|
CCTATGCGTACATACATTCACATTGGGAAGGCATATACCC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:b7fdaa1c2154
|
40 | — | — | — |
|
TCTCCCTTCTGTACATATAATCTGGGATGACATATGCAGC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:60b80df88561
|
40 | — | — | — |
|
TGTGCAAAATGGCATAAACAGGCTGTTCATACAACTTTGT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:b1e942a994f6
|
40 | — | — | — |
|
GAAGGATGGGTACATATATATATGATGATACATATACCCA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:ce1100be3204
|
40 | — | — | — |
|
GTGCATACATACTTCACAGTTTGCATACACAGTTACCCCT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:71285a8dad43
|
40 | — | — | — |
|
TTGTTACATAACTCTAACTGGTGCTAGTATCATATAACAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9fd0e2ac6f4a
|
40 | — | — | — |
|
CTAGTACATACACGGGAAATAACGTGCATATACGAAGCGT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:6de3c6f23455
|
40 | — | — | — |
|
GCGTACTAAAGCCATATACAAAGATTATGTACATAGCCAG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:440f46580af6
|
40 | — | — | — |
|
ATTGCCGTACATAAACTTCATCGCGTTCATATACGAGGAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:7cfd7b136dc4
|
40 | — | — | — |
|
TTAAGCGACATACCATACAGTCAACGTAACTTGGCTGCAT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:cc83523f52ed
|
40 | — | — | — |
|
TCGCCGCCTACTTCGAACTATACCGCGCACCTAAATTGCC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:456ea41b94e2
|
40 | — | — | — |
|
GCTCGGACGTAGCGCATATAACCTGTAGTTACATACGCAG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9b1205f6eb6a
|
40 | — | — | — |
|
CGGGAGTGCGAGATCGCCAAGCCCGATGCTGCATTGACCA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:dd79380e44d2
|
40 | — | — | — |
|
AAGTGTGCATATAATCGCGACCGCTTGCTATTACATACAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9102729a5626
|
40 | — | — | — |
|
AGAGGACATGTGTCATATTCCGCGGAACATAAACATGGAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:29929e5803cc
|
40 | — | — | — |
|
TGTCTTCGAAGGTACATATACAGCGGAGTACATATACCAG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9857b828894b
|
40 | — | — | — |
|
ACGATGCCATACACCAACCGGTGGGAGCTGCATAGCACCG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:92ace35be3b3
|
40 | — | — | — |
|
CAGTATGTCGCTATACATATATAATCATCAATCGCCCGTA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:93eed5903547
|
40 | — | — | — |
|
CCATATGCACTATGTAAACAACACTGCTAATGATGATAGT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:ef6cc9a796ac
|
40 | — | — | — |
|
ATACTAATCAACGTGCTATGTCAATATTTACATTAGTTGA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:59ebd973ab87
|
40 | — | — | — |
|
ACACCCAGGGCATCAACCCTGTCCAGTGGCAAGATGATCC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:a0d1bd320ea4
|
40 | — | — | — |
|
ATAGCAACCATATAGCGGAATATTGCTACATAGTTGCGTT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:32a3a2b626d7
|
40 | — | — | — |
|
GTAAGCACATATACTGTCTGTTAAGTACATATGTTGATAA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:ab42cccfc2fe
|
40 | — | — | — |
|
CCTGCTCCACCCGTGTCCGACGCTACGCGAAAACACGCTA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:534f8d296d35
|
40 | — | — | — |
|
GCCTCAATTATAGCATTGCTAAGCAAATATTGACAAAGGC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:0dd80069f1f8
|
40 | — | — | — |
|
GTACGCGCAACTCATTAACGTGCTAATGTAAACAATGCTT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9e33a043ff8c
|
40 | — | — | — |
|
CGGCTGCACCTTATGTCAATATTGACATAACCCATGACCG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:f486e1ad101c
|
40 | — | — | — |
|
GCAAATATTGCCTTCATTAAGCCGTTAATGTAAACACAGC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:36bb874bed2c
|
40 | — | — | — |
|
ATGTTCATATACTTGTAAAGTGTACCAGTACATAAACGGA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:ad3254259de8
|
40 | — | — | — |
|
TAAGGTGCATAAATTATGCCAGAACAAATTCATACACGTA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:9d6aa8a3d1d0
|
40 | — | — | — |
|
CATGACATCAATGCGATAATGGTATGCAAATATTGACATT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:a61eb727529a
|
40 | — | — | — |
|
AGATATACATATACACAGGATTGTACATATAAGCTTAAGA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:98fd050b6de8
|
40 | — | — | — |
|
GTCACTTCATATGCGAAAGGATATCAAGTATCGCACATAA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:6ca9361e229d
|
40 | — | — | — |
|
GGGTCAGCATATATCCGATAACGCATACATACAGACCCTG
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:6749fdbe142e
|
40 | — | — | — |
|
GCTTATGTGCATATAATCCATTTTGCCGATAACATACACA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:dab490465faf
|
40 | — | — | — |
|
AATATGCGACACAAAAAGATGTTGTATCGCAGGTTGGAAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:2a498c260fd2
|
40 | — | — | — |
|
TCCTTACTATGTCAACTAATTAACTTTGTTTACTTAGTGA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:c17c6c63541c
|
40 | — | — | — |
|
AATGACGAAGTGTTTACTTAATTAGGTCCGTGTTTACTTA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:0f96c7e21776
|
40 | — | — | — |
|
TCCAGCCCGCCGTTACCATATGCATATGCCAAATGCACAT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:b0668eb9e0fe
|
40 | — | — | — |
|
TCAAGCTATGCCTCCATGACCACTAAATCAATATTGACAC
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:b4ac603d5bb3
|
40 | — | — | — |
|
GGGACTACGTTCATATAGGTATTGATCAGTACCAACATAA
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:3639eed7fc87
|
40 | — | — | — |
|
CTAAGTAAATATTGACATCTATTAACACACTTATGCGTGT
PANAPTA:P55317:FOXA1_VAX1:PRJEB66722:R3:f1e9153c94e2
|
40 | — | — | — |
SELEX rounds
R3 ·final