FOXB1_GCM1
CAP-SELEX sample FOXB1_GCM1; Mixture-SELEX sample FOXB1_GCM1 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCACACCCTCATCATGTTTACTGTTTGCGTGTCGCGTAAT
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:b2ee9df3535c
|
40 | — | — | — |
|
TTACTATGCAAATAATGGTCATGCAGGCTGCTACACGTGC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:4ff40c10348a
|
40 | — | — | — |
|
TCCCACACACACAGCAACCGCACCTAGATTCTTCAAATTC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:13ea48b45c2c
|
40 | — | — | — |
|
CGTTCTGCACGCATTTATCAACCACTATTTACACTAAGCC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:f7fa1ae6eeff
|
40 | — | — | — |
|
GGTCGATGACTAAGGATGCATTCTTCGAATGCCTAACTTG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:c6b1bac4d8db
|
40 | — | — | — |
|
TATTCGTACGCCATTATTTACATACCTCATGCACTATAGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:e11b5ca2c3ea
|
40 | — | — | — |
|
TACACGTGGCACGTCCCATCAATGATAAGCTAATATTTAC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:bbef537847bf
|
40 | — | — | — |
|
TGCCCATGAGAGCAGGGCACACCACTATTTACTTAGAGTC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:ab802dc586ae
|
40 | — | — | — |
|
TGGCCACGGGCACTAAACAAACAACCTTGTCTTATGCAAA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:f126765bcfb7
|
40 | — | — | — |
|
CCGCGGGGTGAAGGTTGACTAAACACGAAAAAAAACCCCG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:a1d7c1ed358e
|
40 | — | — | — |
|
ATGTTTACATACCCCTATTTGCTTATGACCGCGACGCCAT
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:24e9c583ca62
|
40 | — | — | — |
|
AATTCCAGGCATGCAGGGGAACTACGAACTCCGCTGCCTC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:c0676c74d5cc
|
40 | — | — | — |
|
GGACGACGGATCAATATTTGCGCAAAGCGATACGTGTACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:679f7ac38cdd
|
40 | — | — | — |
|
CAACGCGGCATGAACACCAGACCACTATTTGATCAACGCC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:d3171d078fa5
|
40 | — | — | — |
|
CATACAGCATAGCCCATATTTGTCCAATCCTTTGGTTACA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:302f85117548
|
40 | — | — | — |
|
TAGACCGTCACGTATCATAGCTCCTTATTTGCACAACACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:28281267d581
|
40 | — | — | — |
|
TAGTAGCGGGATGTCGGTAAATATTTGTCATCCCCCCCTA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:90e758e987be
|
40 | — | — | — |
|
CATAACTACACAATAATGTTTACTTTTGGCCCGCGTATCA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:6d74f017c40e
|
40 | — | — | — |
|
TACTCGGGGCTGTGTACAAATATTTGCACAACATTCGCAC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:4e6b79d99b1c
|
40 | — | — | — |
|
GCATACCCTTCTTGCCGTTATTTACATGCCGCCCGCCGAC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:aa386685fbfb
|
40 | — | — | — |
|
TAACCCTTATTTACACATCGTCATTCTCCCAACACCCTCA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:e8c2db951b0c
|
40 | — | — | — |
|
TGCACCAGCGCGCCATGTTGACCCATCACGCTAGAGTCAA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:e7027b792170
|
40 | — | — | — |
|
TATTTGCATATAGCCCACATACCGTATGATCTGTTAACAA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:d8e9f63ef4fa
|
40 | — | — | — |
|
CACGCCGTGTAAACATCGTCCACATGCTAATGTTTACACA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:7c5cb8708e1a
|
40 | — | — | — |
|
TGCCACTGGGGTGTAACCACTATTTGGACAAGGCCGCGTG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:3d4f4cd6f680
|
40 | — | — | — |
|
CAATACGCCCCGTGCGCGAACTGCCCTTATTTGCATAACG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:350c9eda3442
|
40 | — | — | — |
|
TGCGGGTGATATGTAAACATACGAAGTGCGGTTGTTTGTA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:ea29e4d4cd7d
|
40 | — | — | — |
|
TGGCAAATGAACTTAAAGTAAATAATGGCGAGCCGTCACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:3d6ceab36f52
|
40 | — | — | — |
|
TGTGCGGCACTGAACCGCTGGAATTCACAAAATGCGCTGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:d92b979670b5
|
40 | — | — | — |
|
TCCTCACAATCCGTAACGCAAATAAGGGTCTTAGTTTACA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:d6e5294ac948
|
40 | — | — | — |
|
ACCACTATTAGCAGAATACACCAATATTGACTCGAGCACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:ecd8f82ba91c
|
40 | — | — | — |
|
ACCCAAGGGCACTGAACAAATACGGGCCGCCATTACCTGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:434a94b9aace
|
40 | — | — | — |
|
AGGCACTGTGTCAATACCCCCATCTCCCAAATGGTACATA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:a73495000aec
|
40 | — | — | — |
|
TGCACTGCCACTATTTACACAACAAGCCTGAGGGGCCTGC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:840f7ac006b2
|
40 | — | — | — |
|
TTGACCTAACATCAAAGTAAATACGTTGGCTGCCCGTATG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:9c38696981b7
|
40 | — | — | — |
|
TGTCTTCGGCGCCACCACTATTTACACAAATCCCGCAGAC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:4a34cb2eb1dc
|
40 | — | — | — |
|
TAACCTAGTGTAAACATTTGAATTACACCATCATTACCCG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:8f38d93ace82
|
40 | — | — | — |
|
CGTAAACAAATAGAGGTAGGGCACACGCTTATGCGCTACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:9a3fe45a5f6d
|
40 | — | — | — |
|
ATGTTTACATAATGCCCATATTTAGCTTAGTTCGCCCTGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:d11efe14df21
|
40 | — | — | — |
|
CAGGTCACGCTTCCGTCCAGCCCATATTTACACAAGATGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:1da0bde93487
|
40 | — | — | — |
|
CCCTGACTGTCAATATTGACACACCTGATTCAGCTACCCG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:e742fd9ce602
|
40 | — | — | — |
|
TACAGGGACGCGAACTGCTGGCCAAATATTTACATAGTGC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:b510cfec8c9d
|
40 | — | — | — |
|
TAATATTACGCAAACACGCCCTGTTTGTTTGCTCCACCCG
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:861eb5dd22c3
|
40 | — | — | — |
|
GTATGTGCAAATAAGGGCGCTGTGATGCCGTACGCGCAAA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:ea1afda574aa
|
40 | — | — | — |
|
CGCAATGCATAATGGCACGTACACTGGATAAATATTTACC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:f934d4a19f86
|
40 | — | — | — |
|
AATGACGGCACTAGAATCAATATTTACCCAAAGCCTACAT
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:58de3be70f68
|
40 | — | — | — |
|
ACAATCTGTCGCATTCCCTTATTTACTTAGCACCCCGTGA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:757ddefcacb2
|
40 | — | — | — |
|
AAGTGACCGTAAAACCAACATTGACATAAATATACCAGCA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:7a1628adb39c
|
40 | — | — | — |
|
TATTGAAGCTATCTGCTGGCGCAAAGCATACATGTAAACA
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:8ce9faac484f
|
40 | — | — | — |
|
TATGCACGCTAATACAGCAGCCCATATTTACTTATGTCGC
PANAPTA:Q99853:FOXB1_GCM1:PRJEB66722:R3:93791b477a4a
|
40 | — | — | — |
SELEX rounds
R3 ·final