FOXD2_PRDM1
CAP-SELEX sample PRDM1_FOXD2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTTACGATACTAAAACAACAACTTTCACTTATAGCTACCA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:513fe988010c
|
40 | — | — | — |
|
AACAAACAGGTTAAACTAACATCACTTGCACTTGTTTGCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:db161e4cd260
|
40 | — | — | — |
|
TGTAAGCAAAACCAACTTTCACTTGTTTACCTAACTTACT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:41defaef9eca
|
40 | — | — | — |
|
AGTACTTTCGATTGTTTATTTAACGGCGTTACCGAGTATG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:cb9444793f57
|
40 | — | — | — |
|
CCTACAATAACAATTGGTCAGTACCACTTTCACTCCTTGA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:249612dd4d9c
|
40 | — | — | — |
|
AACGCGCTCCAGTGAAAGTAAGTTTAGAGCTAAACAAACA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:972dc04ef701
|
40 | — | — | — |
|
GTGACGTAACTCACCCTAAGATAATATTATTACACGACGC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:2c387036e3d7
|
40 | — | — | — |
|
ACGAGCTAAGCTAATATTATTGTTGGCGCGTTGCATCGAA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:3fcbe73ed61c
|
40 | — | — | — |
|
TGAAAGTTTGTTTACGTAACCCGCTCTGTATTTGCTTTTC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:009d466abc55
|
40 | — | — | — |
|
ATGCTTTCACTTGTTATTTTAAGGCTTTCGCCCGCTTACC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:e4745055b19f
|
40 | — | — | — |
|
GTTAACAAGCGAAAGTACAAAATAAACATTGCAACGCTCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:679b46c8fd66
|
40 | — | — | — |
|
CAAGCAAACACTTTCCCTTGTTTACTTAGCGCCTAGTAAT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:86abaca86c1f
|
40 | — | — | — |
|
TCAGGTGCTAAACAAATATTATTGTAGTACAATGCCAAGC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:4f504e0dab93
|
40 | — | — | — |
|
GCATACGGTCACATATTAAAGATATATTGCGTTCTGTTTA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:7c960777ca5b
|
40 | — | — | — |
|
ACGACTCACGCTAAACAAACAACTTTCGCTAACATGCCCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:00a0fd0363c4
|
40 | — | — | — |
|
TGAAAGCGCTAAGCAAACATCGCTAACGCAAACGCACACA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:d17c2d1d00f0
|
40 | — | — | — |
|
CGTTCCCTTAAACTAACAAGTGAAAGTAGTATGCTTGCTA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:2fd111ea1dc8
|
40 | — | — | — |
|
CTAAAACTAACATTATTCTAAGGTGGTGCAACAACTCTGA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:32e6b10945aa
|
40 | — | — | — |
|
TTAAATAAACACACTTTCACTAAGATACAGCAACCCGTTA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:1ae6940ec63d
|
40 | — | — | — |
|
TTACGATAATATTATTCTTGCCGTCTGCAGGACAACACGT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:8326cc8cfd68
|
40 | — | — | — |
|
CTAAACAAATATTATCATAACAATGCCTTCCCAACCTACG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:83ca7a2b39cb
|
40 | — | — | — |
|
TGGCTAGATAAACATCACTTTCACTCGGACAAACTGTTAC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:4c904777eb37
|
40 | — | — | — |
|
GCTACGACAAAGCAAATATTAGTTTAAGGCCGACAAGCAG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:d278d1edaccf
|
40 | — | — | — |
|
AAACAATAATGTTATGCTAAGGTCACACGTTCAACGTATC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:2448ea6fdfff
|
40 | — | — | — |
|
GCAACGTTCTGTAAGATAAACATAACTTTCGATTGTTTGC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:963f50b447c3
|
40 | — | — | — |
|
AGGCATGTCCAAAGATAATATTTACGTACGAAACGACGTG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:a646d7b500f0
|
40 | — | — | — |
|
TGAAAGTGGAATAGCAAAGCTAAGCAAACAATAAACAACT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:ed9de3f9aadc
|
40 | — | — | — |
|
TCTGTTTACTTAGTTATGTAAACACGTAACATGTATGCAA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:b77f03b9a12e
|
40 | — | — | — |
|
GCATGCAATAATATTTGTTTAGGTCCTTACGCCCACGCGA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:c906d24722c9
|
40 | — | — | — |
|
AAAGACAAACATTATCTTAAGTAGCATGTTTGTTGTGCAT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:4233865acf86
|
40 | — | — | — |
|
CGCGCCAACGATAATATTATGACAGCGCGACACACGCACA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:a190dd5d68c1
|
40 | — | — | — |
|
TTGGCGATAGATGTGCTGTGTCAATATTATCTTAGGCGAA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:3252a8946502
|
40 | — | — | — |
|
TGGAACGTTTTTCTTGCTTGCATAAACATACTTTCGCTTC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:b1951a82853e
|
40 | — | — | — |
|
TGCGCTTACTTTCGATTGTTTATTTATCCATTTGTGTGCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:7383b8b71a53
|
40 | — | — | — |
|
GTTCCAGTGAAAGTAGTCATGGCGTTGTTTACTTAACGCC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:4169e7c1f28c
|
40 | — | — | — |
|
TCCCTCCCTTATGATAATATTTGCTTTAGCCGCCATTACC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:e952183d7f94
|
40 | — | — | — |
|
CATAAGTTGACATAGCCTCCTTTCAATAACAACTTTCCCT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:558446bbedc9
|
40 | — | — | — |
|
GCTATGTATACGTTGTTGCTTTCACTTGTTTGTTTTTGCT
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:352ce12525a7
|
40 | — | — | — |
|
AGGCACGAAATAACATCGCTAGCTTACCATAATATTATCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:584cb15d6641
|
40 | — | — | — |
|
TAGGTATACGGTTATCATAATATTGACATAATCGTTCGCA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:898873419c7b
|
40 | — | — | — |
|
ACTAGAGCAACAATAATATTTGCTTTACAAGTTGCGTCGA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:2856f488770a
|
40 | — | — | — |
|
ACCCGAATGGTTATGATAATATTATGCTAAGCTCCCGTCC
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:96ad2cd94153
|
40 | — | — | — |
|
CGTGCAATGTAAATATTAGTTTAGACCGTAAGCTTTCGCA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:592bb9773a23
|
40 | — | — | — |
|
GCCTTGTGCAAATATTTACTTAATGCTAGTGTGCTTGTGG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:9839c0ea67a6
|
40 | — | — | — |
|
CACGAGTCCTAACACTAATATTATGCTAACCCACTCCCGG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:f52c6023da0d
|
40 | — | — | — |
|
GTCGTCACTTTCCATTGTTTGTCTAACGAAAGTTTGTATA
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:95aea4684283
|
40 | — | — | — |
|
CCCGTTGAGCGTTACGGTTAAACTAATATTAGCATTTCCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:a1133662af8f
|
40 | — | — | — |
|
AGCTAGCAGAATAAATATTTACATAGCATAACGCGCAACG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:8de011de6276
|
40 | — | — | — |
|
TGTTTACTTAAGCCTTCACTTTCACTGTCTTGGCGATGCG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:b3e5d26021f5
|
40 | — | — | — |
|
GACATCCTTAGACTAACATTTACACAACAGTCCTCCCACG
PANAPTA:O60548:FOXD2_PRDM1:PRJEB66722:R3:786b15c130ec
|
40 | — | — | — |
SELEX rounds
R3 ·final