FOXD2_XBP1
CAP-SELEX sample XBP1_FOXD2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CTACAAAGGAGATGCAGGCCGTCATCTCTACGATCATATG
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:a3fb250969d2
|
40 | — | — | — |
|
TAAATTCCCTCGCACTGAGCTAGTTATGTCACAGAAGCCA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:421e21a843c5
|
40 | — | — | — |
|
GCACGCTAAAACAACAACACAATGTATACGCAACGTCATC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:8d3207692816
|
40 | — | — | — |
|
AATGCTAAACAAATGTTATTGTAAGGACCAACGTGCCACC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:359af9d134f1
|
40 | — | — | — |
|
GAAACTCGCAGAGCAGGAAAACCCGTTGAACCGCACCATA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:daa5bc25b4e6
|
40 | — | — | — |
|
GGCGTCATTAAGTAAACAAACTGGATTTACGCTATGTATA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:6e6393245a27
|
40 | — | — | — |
|
CAATGGAGCTAAGCAAACAATAAACGTACCGTTATGCCAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:c5e2f169fa32
|
40 | — | — | — |
|
TGACGATTCGAATTGCACGCGACTGTGTATAGCATGATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:a9801ef83ce1
|
40 | — | — | — |
|
GCCTAAAGCAAACAATCCATCCGCGAACACTAACGTATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:bd21d899b1be
|
40 | — | — | — |
|
AATTATGGATAAGCAGCCATGTTCAACCATCGCGTTGTAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:33c4f525cc5b
|
40 | — | — | — |
|
CACAACGTTTATGACCACTGGCTCAGCACGAGAAATGAAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:ddf744697c21
|
40 | — | — | — |
|
CTAAAACACAAATGAAACAGGCGCGCCACCCACGTGGTCA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:7e7806eab6e6
|
40 | — | — | — |
|
CAACCCGCGTCGAGAATGCTAAACAAATATTTGCTTTAGG
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:6214d3477d1f
|
40 | — | — | — |
|
GCATCTCGCTAAACTAATATTAGTGTTACCGCTATGCACG
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:1d506a7f72b9
|
40 | — | — | — |
|
TGCGGAGGAACGATAATATTATGATAAGGCAGGCACGTAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:3484adb1b194
|
40 | — | — | — |
|
CTAAACAAACACACGATATCATCGCTAAACGATGTGCTGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:2a49d3c0e91a
|
40 | — | — | — |
|
TTATTTTAACGCCATCTCACGCAACGTAAACATTCCTTCA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:fb27068246e0
|
40 | — | — | — |
|
CCTGTTCCAACATTAACGCGAATTGAAGATCAGCGACCAA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:2bbaeed3298e
|
40 | — | — | — |
|
GTTGGCCGTCTTAAATAAACAGTCGTGATGACTAACGATA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:be6c87451e3a
|
40 | — | — | — |
|
CTAGAATAACATTTACTTAGCGACCGAACGCTCGCAGCAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:25a950126051
|
40 | — | — | — |
|
TTAGAGATACAACGAGACCATGCTAAATAAACAAGGCTGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:3957250c20da
|
40 | — | — | — |
|
CTACTCCGCCCCGTCAGGCTGCTCCAAGCTGCTGACGTGG
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:11d45e697a3e
|
40 | — | — | — |
|
CAACAGAACATTGTTTACATAGCATCAACCTCAACGTACA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:2e6bfc6655d0
|
40 | — | — | — |
|
TGATGCCCAACGTAAACGGTGGGCCTTACGAAAACAATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:97220af5985e
|
40 | — | — | — |
|
CGGCACACGGTTAAACAAACAATACGCTAAGGTAAACACA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:6940502ea40d
|
40 | — | — | — |
|
AGATAGGGACAAGACAAAACAAACTTAAATGATGACGCAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:978974b944fd
|
40 | — | — | — |
|
ATCAACACACGATAGTTATCGTAGTGTGATTTCACGATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:b9b1b1610492
|
40 | — | — | — |
|
GTCCGATTAGAGGATCTGCAGGAATGGAATCCAACAAACA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:216a92990e44
|
40 | — | — | — |
|
TGTTTACACAAGCTCAACTATTAGCTCTAGTGACTGATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:de16dff1a385
|
40 | — | — | — |
|
AGCGTTCAGTGTCATATGTGCACACTGCCCTTTCGGACAT
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:67afb183a9a1
|
40 | — | — | — |
|
CACACCTTAAACCTTCAGTGTTTACATAACAAATAGCACA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:57bb85f7f0b0
|
40 | — | — | — |
|
ACTGTCCACCGTACCTTAAAATAACAAAGTGGTTACGTGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:0972768c7df1
|
40 | — | — | — |
|
TAGAAGTCTTAAACAAACAAGGACAATGTTTACATAACGC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:239d88b89547
|
40 | — | — | — |
|
TGCTAAACAAACAGTGTAGGATTATCGCATGAATACATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:4d49b8e1f6df
|
40 | — | — | — |
|
GTAAACAGCGTTGTTGACGTAGCTACTCGACAAATGCTGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:8910c0c8347e
|
40 | — | — | — |
|
GCTTAAACAAACAAACGGACGTTGTCGCGTGACGTAAGTG
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:29d92a9e86a8
|
40 | — | — | — |
|
GAACTGCCTCATCGTCAACAAAGAATTGTTTACTTAATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:22d2466605a5
|
40 | — | — | — |
|
TAAGATCTACAACAATAACATTATCATAAGGATATGCCAA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:240ce18c48f3
|
40 | — | — | — |
|
ATTCCCTGACGTCGTCACTCCGCGCGCACAATATGCGCAC
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:fb7691e0e60a
|
40 | — | — | — |
|
TACACCCATTAAGTAAACATTGCGTCTTACAACAACACGT
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:a8c7b157466e
|
40 | — | — | — |
|
ACACGCAATGTTTACATAAACCTCACTGCATTACGCGTCA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:2aaefea34ab6
|
40 | — | — | — |
|
GGCATCGCTTAAGTAAACAAAGAATCTTCACGCTAACAGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:9f1c998fef7f
|
40 | — | — | — |
|
CAGAACAAACAATCACATCTGCCCCCCTGCATCATGATGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:4eee8d4fc5b4
|
40 | — | — | — |
|
CCCAGCGCTCAACAAAGTCTTCGTCTCCTAGACAAGCTAT
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:a1adea8aea3a
|
40 | — | — | — |
|
CATGCGCTAAACAAACCTTGTTTTAGATACACAATGCATA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:a86a5db2af78
|
40 | — | — | — |
|
TTATCACTACAATAACAAACGTTACCGGGTACGTGTCAAA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:e10f7894b5e8
|
40 | — | — | — |
|
CGATAGGACGGCATGCTTAAGTAAACACGAGCAACGTTGA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:38223e9b94f6
|
40 | — | — | — |
|
GCAAGTATCGCTAGATAAACAAACTTCTTCCTTGCGCATA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:5a85bda83a4b
|
40 | — | — | — |
|
GCAACGTCGGGCACCTTAAGTAAACAAATAATTAACGACA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:b065e23fd481
|
40 | — | — | — |
|
AAACAATAACTGACCATTACATAATGTGATGACGAGACAA
PANAPTA:O60548:FOXD2_XBP1:PRJEB66722:R3:3567b8b228e7
|
40 | — | — | — |
SELEX rounds
R3 ·final