GABPA_GCM1
CAP-SELEX sample GCM1_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACATGCTGGCTCAGCCGATAAGCGTGCTTCCGGCGCGCTA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:7f5df761a3ea
|
40 | — | — | — |
|
CGCACTACCTGACTTCCGGGCTGCCTAGGCCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:85cfc450fcef
|
40 | — | — | — |
|
AACGGAAGTACTAACGGTTTACCCTGACCCTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:f51d5e95a6cd
|
40 | — | — | — |
|
CATACTTCCGGTTCGCGCACCGGAAGTCGAGCTATGACAA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:1dd88b648338
|
40 | — | — | — |
|
ACACCACGTCCTTCCGGTTGCACATGGGGCAACATCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:0b6621e1bd20
|
40 | — | — | — |
|
GCAACTAGACGCCGTAAGTGTGAGCCAACTTCCGGTAAGT
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:e7ff1740ae43
|
40 | — | — | — |
|
CACTGCGATCACCAGCACTGTTACCATTTCCGCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:491bb4ca813e
|
40 | — | — | — |
|
GATATGATCAGACACCGTGCGCCGGAAGTGAACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:1d4ffee82a39
|
40 | — | — | — |
|
CAGCTATATCACCGCGAGCGGAAGTGGCGCTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:ef2cd9658533
|
40 | — | — | — |
|
CGTGGCGAACCATACCGGAAGTCCAACTTCCGGTACCAGC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:5952bc903123
|
40 | — | — | — |
|
GACAGGCAGGCTTCCGGTGCCAGTCGGTGCTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:49489695c7cf
|
40 | — | — | — |
|
CAAAACCGGAAGTCGTAGTTCACTTCCGGCTCACTGTACC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:8facca500a42
|
40 | — | — | — |
|
GGGACCTCGTCAGACCGGAAACGCATTTCCGGTCACCGTC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:0661f9d664f2
|
40 | — | — | — |
|
TCAGCTTGACCACCCGCATCCGTTAGCCTACACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:e7167bb45035
|
40 | — | — | — |
|
GGTCGAGCGCACACTTCCGGACCATGCCAACACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:42212747e1a8
|
40 | — | — | — |
|
AACATCCGCAACGTTCCGAACCGGAAGCGAGGCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:7843c1e79708
|
40 | — | — | — |
|
ATGGCCATCACATCCGTCGCGTTCTCGGCCCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:0a33a2c62964
|
40 | — | — | — |
|
CCCTTTCCGTTTCCGGCTCGCACCCCTACTGACCGGAACC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:05b5c9c81bbe
|
40 | — | — | — |
|
CGTCCCGATAAGGAAGCGAAACTTCCTTCCGGTCTTACCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:d5cac0f7baa8
|
40 | — | — | — |
|
GACCCACGTCCGACTTCCGCCATCCAAGCGCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:84d513105bf7
|
40 | — | — | — |
|
CACGACCCGGATCCGGTTCTCCACTACCGGAACTTCCGCT
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:5b435c47b50c
|
40 | — | — | — |
|
CGGATGCGGGTGTGCACAAAAGCACTTCCGCTCTCCACGA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:2ca47889d2f8
|
40 | — | — | — |
|
ACCTACGCGTCTGTCCCTTGCCATCACTTCCGCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:79df5b70f09d
|
40 | — | — | — |
|
CTCTTGTCTACACTTCCGGCCCACCACCTCCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:6f1f7867a8a0
|
40 | — | — | — |
|
CGGATATCCGCGTGGCTCGTACCCGCACCGTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:7ab0f48638a8
|
40 | — | — | — |
|
CCCATCCGCTTGCCAGTTACGGGAAGTTACTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:013ff8347924
|
40 | — | — | — |
|
GGCCACCACCGGAAGTAGACGGCCGCCACTAACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:7c2f40a51ac5
|
40 | — | — | — |
|
CGGCGCCAGACAATTGAACCGTAAGCAACTTCCGGTTCGA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:5cd7f16d3b51
|
40 | — | — | — |
|
GCTTCCAAACCCATTTCCGGTCAGCACTAGCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:35117634d6f3
|
40 | — | — | — |
|
CACACTGGCATGCAATTTCCGGCACCCTACTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:4eae1ef779f6
|
40 | — | — | — |
|
GAAACACACCGGAAATGACAGGCGGAACCGGAAACCGTAA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:3fa07f86bf43
|
40 | — | — | — |
|
CACTCCGTTGGCGGATGTGGTGGGTGGAGCCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:d2f94de87c46
|
40 | — | — | — |
|
CGGAAGTATGCGACAGGAACCGACCCTAATTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:331b67114525
|
40 | — | — | — |
|
TTATGCACACGTTCCGGCTAGACCCGTAAGTTGCATGTGT
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:d768ac27abba
|
40 | — | — | — |
|
CCCCCCGTCCTTACGCGCTAGCAAGTACCGGATATCCGGT
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:f7dd4adcc2de
|
40 | — | — | — |
|
TACGCGCAAGGACTTCCGGCGACAAGCCCGCATCCGTTCA
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:2d728c3ebbd6
|
40 | — | — | — |
|
CATTCGCGCGGGACGGAAGTAAGATAGGCCCACATCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:494ef33c3822
|
40 | — | — | — |
|
CACATACGAGTGTTACATCCGGTACGTTAACGCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:965c3b2203f7
|
40 | — | — | — |
|
CGCGCCCCGCCCGGAAGGCACCAAACATACCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:1c686fb7cdca
|
40 | — | — | — |
|
CCACACGGAAGGAGCCATCGCATCCGGTACGTCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:ff62d5c47fcb
|
40 | — | — | — |
|
ACCGGAAGTTGAGCACATGCTTCCGCTTACGGTCCCTAAC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:4b2f59ca410c
|
40 | — | — | — |
|
CACATCCGTCTGTAGCACTAGTCCCCCCACCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:a6e90deb8d6d
|
40 | — | — | — |
|
CCCAATTTCCTTCGTCAACTTCCTGTTCCCAACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:24232bebe4cd
|
40 | — | — | — |
|
CCGATGACAGGAAGCTTTGGCTTCCGGCTGGACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:2189aa3dd88d
|
40 | — | — | — |
|
AGCTAGTGCGCATCCGGTTCCATACCCTGCCACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:f3ca6fe67fb2
|
40 | — | — | — |
|
GCACCACTACTTCCGGAATCTACCCGTGACCCGCATCCGG
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:36754abe2f5f
|
40 | — | — | — |
|
ATACGCATCGCACAGCACCGATACCGCTTCCGTTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:c8b5c1aa2122
|
40 | — | — | — |
|
TAACGAAACGCAGTTCCGTCTCCCTCCACGAACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:d061be14095e
|
40 | — | — | — |
|
CAACCGGAACATCCGTTGACCTTCTCATGCCGCTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:67fd303f160e
|
40 | — | — | — |
|
TGAATGAGCCCATTCACTTCCGCCCGTTCGTACTTCCGCC
PANAPTA:Q06546:GABPA_GCM1:PRJEB66722:R3:d2105816354e
|
40 | — | — | — |
SELEX rounds
R3 ·final