GABPA_HOXA10
CAP-SELEX sample HOXA10_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TACGCGCTAGTGTTCCGGTTACGACACGAAACAACATACA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:9b0bb09bd892
|
40 | — | — | — |
|
GCAACCACACCCACAACCAGCCCGCCCTCCCCCACCAGTG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:4c0c986f9841
|
40 | — | — | — |
|
TCAACCGGTAAACATCGTTTCCGGTTGCCCACCGCCACAA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:7e599469ad4e
|
40 | — | — | — |
|
ATCGTAACAACTGCCCGTAAGTCAGATCATTGACTTCCGG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:61a77792963c
|
40 | — | — | — |
|
AGCAGCCCTCGTCCACACCTCCGACTCGCACACACTCCTA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:91ee69e27c13
|
40 | — | — | — |
|
CCGGAAACTTACGCGCGATTCAACGCCGGAAGTCCCACAG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:2438a1b7f1ad
|
40 | — | — | — |
|
CACACTCATTTCCTTCCTGCCTCTCGTCGTCACTTCGCCT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:8721c1f400ff
|
40 | — | — | — |
|
CGTACCCACTCCCGCCCCCCCCGCACCAAGATACGAGGCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:7da8ec818fcf
|
40 | — | — | — |
|
TGAGTCATGGCCTCCCTCTTATAAGAACTCCGCGCACCCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:b0bfc314c76d
|
40 | — | — | — |
|
CCAACGCCCTCCACCGCCAACCCCCGTTCCAACCGCCCAT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:d7985efa9670
|
40 | — | — | — |
|
ACCGGAAGTGACATTTACGACCCCCCACACCACGACACAC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:113bf3c5b5a0
|
40 | — | — | — |
|
ATACCGTAAGTAGACAAATAGTTGCTGCTTCCGGTCGACC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:b95eec8913e0
|
40 | — | — | — |
|
CGCCCACTCTCCACTTTCGCCCACTTGCACATACCTCCCG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:afa601b36b9a
|
40 | — | — | — |
|
GAAGTTACTAGCTCACTCGCACGGAGTATGCACAACCACT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:6fedcc6b2df2
|
40 | — | — | — |
|
AACGCACCCCCGTAATATGCACTTCCGCCTTGACCCATCC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:07dbd574c778
|
40 | — | — | — |
|
AATGACTAACCCAACGTGCTCCTCTTCCGGACCCCTGCCG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:6c3e23f00296
|
40 | — | — | — |
|
CCATGCATGCTTCATGTTGACCGTAAACACGTTTCCGGTA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:d1707009ef43
|
40 | — | — | — |
|
GGCATACCCTTTCGACCGCTAAGTCACAGACATCCGGTCC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:ea4a1a824795
|
40 | — | — | — |
|
CTAGCGCACGTCCGGTCACTCGACCGTTAAGTGGCGCTCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:4855787f97a0
|
40 | — | — | — |
|
ACATGGTGGACAGTTAAGTAACCGGTACTTCCTGTCACCG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:6ab617691561
|
40 | — | — | — |
|
TGCTACTGATAACCGGAAATAGTGATTTACGAGGTATGCG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:b36ae1d7a7e4
|
40 | — | — | — |
|
CCCCACCCTCTTACCACAGCACCATGACCAGACCCTCAAT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:489a91a3f2a8
|
40 | — | — | — |
|
AGCATACTTCCGCTACGGTAGCGATAAGTCGGGCTCCACA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:dcb8aefda516
|
40 | — | — | — |
|
GGTTGACCCACTCACCTGTTTTACGACCTACTTCCGGCCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:46710372490a
|
40 | — | — | — |
|
ATGACCGCCGTAACAAATGTGCCGGCGTGTTCACCCGTTG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:db78f1f294b1
|
40 | — | — | — |
|
TGTTGTATTGGTGTATCACGTAATAGGTCGAGCTCACGCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:8fd8f4bfaaa5
|
40 | — | — | — |
|
GCCCGACAACTTCCGGTAACAACCGTAAGTACTGACACGT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:4fe60c2b1700
|
40 | — | — | — |
|
TTGAGCGTACCGATAAGCTGCTGCCTCCGGTAGGGCCCAA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:8ea36f8de154
|
40 | — | — | — |
|
TTCGCGACATAAGTCCGTAAACGTGAGCTTCCGGCCTCGG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:32b00fd5df33
|
40 | — | — | — |
|
AATCAGCCGCCATTAATTGCCTCCCCTAATTACGTCGAGG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:2f5089777455
|
40 | — | — | — |
|
CGCAGCTCAGCGCGCACACCACACCACTCAATGGCAACGT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:a547d34bec96
|
40 | — | — | — |
|
ACGGTCGTAACAGCCGCATGGCACGAACCGGAAGAGCCAA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:e95806129347
|
40 | — | — | — |
|
ACTTCCGTTTCTCGTAAATCATGAATCCCCCTGCTTTATG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:260cc6d61864
|
40 | — | — | — |
|
CACCTACGCACCCCCTCCACCTGTTACATACCGCCCCTAA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:1e4c458b05f5
|
40 | — | — | — |
|
TAACGCACCCGGCGCACCAATGTACGCCGCACCAGGACCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:65f068c70404
|
40 | — | — | — |
|
TAACGATCACTTCCGGCCCCAAGCCTGCCATAACAGACCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:68eff4866558
|
40 | — | — | — |
|
CGAAACAACTACTCCACCGGAAACCCCTTTCCGGTCAAGC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:e39f90b8d31a
|
40 | — | — | — |
|
ACGCTCCCTTTGACTCCACATGCCACCACCGTCAACCACC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:e0fb7aae55a0
|
40 | — | — | — |
|
AACCGTAAGTCAAACTACGCTAGTCTTCCGGTAAAACATT
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:e54ff4220acf
|
40 | — | — | — |
|
ACGGTTGCATTGGACCGGAAATGACCACCCAACACGCTAC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:9b78b91bfdb3
|
40 | — | — | — |
|
TAATTGCCGGAAACCGGATATCACCTTAACGACCACCCGC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:d5a375ec87d8
|
40 | — | — | — |
|
CCCACTCACTTCTCCTCCGCCCCGCAATGCACATAAGCTA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:d6a726a527f8
|
40 | — | — | — |
|
AAGCCCTCAAGCTCCCTAGTCCCCCCCGGCCACACCGACC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:9e3918b7449d
|
40 | — | — | — |
|
GGACACGGTCCGCATGCCTCCCCAATCAACACCACGACTG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:240c2c5248b3
|
40 | — | — | — |
|
CGAAGAGTCACGCGCTAAGTTAACTAGCTTCCCGCGTGGC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:5cae6c3dc3f4
|
40 | — | — | — |
|
ATCCGCTTTCGTTCCGCACCTGACAACTGACTACGCAGCA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:e5bc781c478d
|
40 | — | — | — |
|
ACCCACCGACAATCCAGCCCCACACCCCACGCCGTATCGC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:234ca2e81ce2
|
40 | — | — | — |
|
AGTACGTGTACCACATCACCAATACTCATAACGCCGGCAA
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:96afd90241cb
|
40 | — | — | — |
|
GACTACAACCCGCCCACGGCCGGCCCCCGCCTCCGCCAGG
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:398a53d83cf1
|
40 | — | — | — |
|
ACACATGCAAATTTCCGGTACGTCCCGTAAATCATCCGCC
PANAPTA:Q06546:GABPA_HOXA10:PRJEB66722:R3:53567bceadb0
|
40 | — | — | — |
SELEX rounds
R3 ·final