GABPA_HOXB5
CAP-SELEX sample HOXB5_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AATACCATCCGTAAACAAGGCTTCCGGTTGTGTGACGCTC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:315a4266569b
|
40 | — | — | — |
|
AGCGGAGTTAAGTGCCGTAAACACGTTTCCGGCAGGACGG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:4af352cfe181
|
40 | — | — | — |
|
TCAAACCGTAAGACAGGTTGTCAGCCGGTTTGAGACAATG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:f88222fcfc2b
|
40 | — | — | — |
|
TACAAGCCAGGACCGGAAGTGCTAGCACTTATCGGTTCCA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:43aa3eac15a8
|
40 | — | — | — |
|
AGCTAAAGAGTAACACGTAACCTCGCTTCCGGTTACTATC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:e2e2ca99ee05
|
40 | — | — | — |
|
GAAGTGTAACCGGTAAGTGTAGCAACGTCACTTCCGGTTC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:8d03d9cd6f69
|
40 | — | — | — |
|
CACAAAAGGGCATATCCGGTTACTTCCCGTATATACCACC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:4fe5c4c2da8b
|
40 | — | — | — |
|
CGGAAGCCATGCTTACGTCTGCACCAGCTTTCCCCCTCAA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:529d70f3beaf
|
40 | — | — | — |
|
AAACCATCAACAGACCGTAAGCTAACTTCCGGTGCACGGC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:59c8f966d374
|
40 | — | — | — |
|
TTTCGCGCCACGTAAGCTGGTTTCGCTTCCGGGCGAAAAG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:8aee9346349b
|
40 | — | — | — |
|
CGGACGTAAGCAACCACACCGGAAGTACACTTCCGGCTCG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:f043ae18eda5
|
40 | — | — | — |
|
ATGCAAGCCGGAAGTACCTCGACTACTTACCGGCCACGCT
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:be4af15e1f8f
|
40 | — | — | — |
|
ACGCACTTCCGGTAAGGTTACCGTAAAGTGGGAGTGCAAC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:0ac460eab0f6
|
40 | — | — | — |
|
GCTGGACAACGTAAATGGTAAGCACTTCCGGTCCTACAGC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:7ff3074c72fd
|
40 | — | — | — |
|
GCAAACTCTCACTTCCGGGCAACCGCGTAAGATCGAGTGC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:c3ce16497c28
|
40 | — | — | — |
|
ATTCCCGCCGGAAATGACAAGTCATTTAACGGTCAGTCCG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:ceca0809f979
|
40 | — | — | — |
|
TGGACTACTTCCGGTCGCTGATATGGACACGGAAGTGGAG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:15b933882d06
|
40 | — | — | — |
|
GCCGACCGGAAGTTAGTACTTACGGTTTGATAATGACGGT
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:e0a6cea85b91
|
40 | — | — | — |
|
GGGCGCCACCGTAAGCACGCTTCCGGTGGCAACAGAGACA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:02d1e60648c1
|
40 | — | — | — |
|
CGGAAAGAACAGCAATTACGCCAGCAGGTCTTCCGCCCCC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:8d3f095b2bf8
|
40 | — | — | — |
|
ATCCGTAAGTGGCGAACTTCCGGTGGGATTAATGACGCTA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:4eaabf38cd50
|
40 | — | — | — |
|
AGATGTACCGTTAAGTGGAAATACTTCCGGTATGCAAGAT
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:412305e66920
|
40 | — | — | — |
|
AACTTCCGGCACAGCCGTAAGTAAGCCCTTAGTGACAGCA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:83dd5e3825b3
|
40 | — | — | — |
|
TACTTCCGCCTAACAACGGTTACCGGAAGTACATCATCTC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:c9b84fb167d6
|
40 | — | — | — |
|
GGACTTAACGGGGGTACCCCGGAAGTTATCGCAATGTCGA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:4ab02da9b1af
|
40 | — | — | — |
|
CAACACTTACCGGAACTCTCCGGAAGTTCGTTAGGTCGTG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:74be3826ed32
|
40 | — | — | — |
|
CGGAAGCAAACATCATCAGCAGAATGGCCCTAACTACTGG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:cc7a7404d3ba
|
40 | — | — | — |
|
TAATGACATGCTTCCGGCGATACGCCGTAAACGTTTTAGA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:5c6ef61363cf
|
40 | — | — | — |
|
ATCCATTCGCATCCGGCGTGCAGATACACCGTAAGCGAGA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:23c2c5b6d327
|
40 | — | — | — |
|
ACCGGAAGCCTCATACTCGAGACTTACGGTTCCCCCTGTG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:eabd96ff2b9f
|
40 | — | — | — |
|
AGAGACTAATTTCCGGTAATTACGCGTAAATAAGTGAAAG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:16f24b003a94
|
40 | — | — | — |
|
GGGACCCGTTTCCGACCACCGTGCTCGGCAAACGGACGCG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:11a84385831a
|
40 | — | — | — |
|
ATGACCACCGCCTGATCAATGGCTGAAAGGACACGTCACG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:4bb15eb2aa48
|
40 | — | — | — |
|
GCAACCAATTAACCGGAAGTGGTTCTTACGCGTTAAACCT
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:377f1b3547fe
|
40 | — | — | — |
|
TCGCACCGATAAGTCCAACCGACTTCCGGTCATGAGGCAC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:5413ecdd4257
|
40 | — | — | — |
|
GAGCAGGGCTTCCGGTGCTGCTCACGCGTAAACAATTGTC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:d277febeba17
|
40 | — | — | — |
|
AATTAGGATGAGACCGGAAGTGACACGTCCGGTTCCAGCG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:a6fb85eee906
|
40 | — | — | — |
|
CGCCGGAAATTGCTAATTTACGGCCTACGCACAATTGTCC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:77db786801c4
|
40 | — | — | — |
|
GCCATTACAGCCCCGAAGCGCGCTTCCGGTCAATAGCGTA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:d9898181463d
|
40 | — | — | — |
|
ACATAGGTCCGTAAGTTCTGACGAAACTTCCGGGCGCCGA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:adbfdbfe6b02
|
40 | — | — | — |
|
TACAGGGGTTCGACAGGCGTAAGCAGACTTCCGCTGTCGA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:46cf042f3f06
|
40 | — | — | — |
|
CACCGGAAGTGTACTTACGCAATGACACGAACTTCCGGTT
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:7e696fb44814
|
40 | — | — | — |
|
CACAAATCGGGACTTCCGGTCGAGCAAGCGACAGGAAGTC
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:9bea99ce891e
|
40 | — | — | — |
|
TCCGACCCCCGTAAGTCGACTTCCGGGGCAAAGTAGCCAA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:e325838ed459
|
40 | — | — | — |
|
AGACGAGACGCTATGAAAACCGTATGCTGCATGCATCCGG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:a13f3f689a06
|
40 | — | — | — |
|
CAGTTTATCCGATAAGGAGCTACACTCCTTCCGGTTACGG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:3fb70e238710
|
40 | — | — | — |
|
AGGGGGATGGTACCGGAAATTGCGAGTACTTCCGGCACGG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:89c5a03bc493
|
40 | — | — | — |
|
GGCAATACTTTCGTTATAACTTTTCGCACACAACAGTACG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:f466e67d9fd5
|
40 | — | — | — |
|
CGCATGCTTGACCTAATGGCCTTATCTTCCGGTCCCGTAA
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:484c1ac39b33
|
40 | — | — | — |
|
CGGAAATGGCACTTGGCTGCATTTCCGCTGCATTTCACAG
PANAPTA:Q06546:GABPA_HOXB5:PRJEB66722:R3:6efb7775e7cc
|
40 | — | — | — |
SELEX rounds
R3 ·final