GABPA_HOXC10
CAP-SELEX sample HOXC10_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GACTCGTGACCGGATGCGCTAGCCGGAAGTGTATTCATAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:693bbcea5136
|
40 | — | — | — |
|
CCGCTACTTCCGCTTCCGCTTTCAGTTGCACGCGTGTCGG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:3c392dc38034
|
40 | — | — | — |
|
CCCTGACTGCTGTGCTCCTTCCGGCGTACTCTTCTGCTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:6e78e86ff2c3
|
40 | — | — | — |
|
ACACCGGAAGTACCACTTGGCCGGTGTCCGCCGCTGACAC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:9953ab0a34a6
|
40 | — | — | — |
|
CAGGACCTTCGAGACCATTCCACGCTTCACTGGTCCAGTG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:d02d4611e1d0
|
40 | — | — | — |
|
TGCAGACAACAGCCCTGTTCTGGAACATTCTGGACGGCAT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:19b1d75f6ebb
|
40 | — | — | — |
|
GCATGGCGACTGCCGCCAACAGCTAATCTACTTCCGCCTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:e594c0b039ca
|
40 | — | — | — |
|
TATCCGCATGTATCGAATGTTCTCGAAAACTGTCCACAAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:53bdd7b8f4ec
|
40 | — | — | — |
|
GACCACCACCTACCATAGACCGTTACCTCCCCTCCCACGT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:cfa348323b70
|
40 | — | — | — |
|
TTTAGGTAACCACCCCCTTTTGGGCGGCTTTACAGAATAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:55a0204a417f
|
40 | — | — | — |
|
CTCCAAGTGCTATGCAATTCATCTTCGTTACCTAACCCCA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:74ce44f2af31
|
40 | — | — | — |
|
ACCACCTTCCCGTTCGCACCCTACCTGCCTTTCACCCTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:f42c9e2e3ff6
|
40 | — | — | — |
|
CCCACCACCGCATAGGTGGCCGTCGTGGCATTTCCGTTAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:5b77b055e7f1
|
40 | — | — | — |
|
CCCCACCGCGTGTATTACCCCACTTCCCCCACCCTGTCCC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:465265b9b8aa
|
40 | — | — | — |
|
TTCCTACACTTTCCTGAACCTTCGAAGCGCTTGCAGGTAG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:0fbdd1ef405b
|
40 | — | — | — |
|
CGGGTCCCATAACATGCGCCCATCGTTCTACAGCCATTAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:b1e6eab04f15
|
40 | — | — | — |
|
ATATCGTCTTTTCCTGTTCATTCTCCTATGAATCGCGCCC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:9fb41ae3df98
|
40 | — | — | — |
|
TGCCTTACACCACACTCTCCCCCTATCGCGACGTGGCACG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:0502acd23700
|
40 | — | — | — |
|
GAACGACGCACTAACTCGCGTCCATGGAAGTCACGTCCCG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:e8b14853a464
|
40 | — | — | — |
|
CACGCCCTGATGTCTAGAACATTCTAACCGCGATACGCCA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:731b3766fa0f
|
40 | — | — | — |
|
CTATTGCGCACCCCGCGCAGAACATCGTGCTCCGTTTGCG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:6fe64de22578
|
40 | — | — | — |
|
AACGATACTCATGGAACGTTCTAGATAACGTACAACTAAG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:498b17ac55a3
|
40 | — | — | — |
|
TTGTTGTGAGGTATGTTTCTCCCATCTAGTGGGCTGTCGT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:40e36a827d65
|
40 | — | — | — |
|
CTGGTACATCGCTCACGGTAAGTGTGTTCCTTGTCACTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:a358440655ee
|
40 | — | — | — |
|
CCCCTATATCATACAACGCACCCCTACCGATACGCCGTCA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:68077ec4ae75
|
40 | — | — | — |
|
CCTCTGCCACCGCTTATCCCACAAAAATCCAACCCCCCTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:7c6d56c9b32c
|
40 | — | — | — |
|
ACAAACCACCGCATCCCCACTACACCTCCACCTCCCCCAT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:2412b6e773ab
|
40 | — | — | — |
|
GCGTCGACGTGTAGTCCATGCGGCCCCCCCGGAAACGTAC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:5f30d2cfafd0
|
40 | — | — | — |
|
CCGAATGCTACTCCCCACCTACCGTCCACTGACACCTCGC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:121993be0f64
|
40 | — | — | — |
|
TTCTGCTAAAATGCTATCGTACCCTCGTAGCGCCACGCGC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:c7cbbdb36efb
|
40 | — | — | — |
|
CTCCCCCCATGTTCTATCCAGAACGTTCGACCACATATGG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:4a3fbf6392d6
|
40 | — | — | — |
|
AATAATCGGAGTAATAGCGCTCTACTGATTCGAGAACATT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:7e60493d2c7a
|
40 | — | — | — |
|
TCATTCTGGAACATTCTGCCGACGAATATACGCGCGTGAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:ebfdfaeba940
|
40 | — | — | — |
|
AAAATGACGTTTCTCATGTCATGCTAAATCTAAAAGTGCG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:b489a613b162
|
40 | — | — | — |
|
TCATTAACAAAGCACTTCCGGTGCAACTAATGTACTTGGT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:a4754e034660
|
40 | — | — | — |
|
CTCCTAGTTTATCGTCATGCTTCCGCTGGGACACCGGAAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:50bfa20a197a
|
40 | — | — | — |
|
GCGCACCTAGTTCGACCAGCTTCCGGTCTTACTCTCGCAC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:0b94560150b9
|
40 | — | — | — |
|
GCCACACATACCGCATCTCCTCCACCCACCCACTTGCTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:85d384b00a2e
|
40 | — | — | — |
|
AAAACCCGACGACCTACCCGCCACTGGTATCACCGGTATC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:083265905a2e
|
40 | — | — | — |
|
CCTGCGATGGACCGTTAAATAGCATTTCCGGTCCGTCGTT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:667690cdbb26
|
40 | — | — | — |
|
ACCCGTCGTAAATCTACTGCGCGTCGCCGCTGTCCGTCCC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:81d7c2d69043
|
40 | — | — | — |
|
CCAATCCGGTGGCCCCTGCACCCTCTTCCCCATGCCACAA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:6ef2bae5208e
|
40 | — | — | — |
|
CCCTTGTGTGTCGGTGACAACGGACGTCGTAACTTTATCT
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:5482458ba0b3
|
40 | — | — | — |
|
CACCTAAGCTCAACACATTTAGCTCAGTCAATTAATCTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:15d7f93990d2
|
40 | — | — | — |
|
CTCCACATGAGCGCGCTGAGCAAGCACCGCCCCCACGCAC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:6224cc1d61f3
|
40 | — | — | — |
|
TTTTCGTCAAACTACTTGCACCACACGCTTTATTGCCCTA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:83c049ba249c
|
40 | — | — | — |
|
TACCGCCACACCCTCCTTCCGTCTGGCCTCACGATTGCGA
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:f2e09acfee9f
|
40 | — | — | — |
|
CCTCCTGCGCCCACAACTTGCTCGAACGTTCCGCCGTTTC
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:04064e295306
|
40 | — | — | — |
|
TCCCCCCCGTACCCTTCCCAGCGACCTCAGCGATCACAGG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:9edd7380f415
|
40 | — | — | — |
|
CCGATATGTCCTAAGCTAAGATTTTTCTTCCGGTATCGGG
PANAPTA:Q06546:GABPA_HOXC10:PRJEB66722:R3:3089c0247910
|
40 | — | — | — |
SELEX rounds
R3 ·final