GABPA_HOXC11
CAP-SELEX sample HOXC11_GABPA · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCTACGACACGGCCATTTCCGGTTCCGGGGGACACTCCA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:93ddee654bd5
|
40 | — | — | — |
|
CGAGCCCACCTCACCTACCCCCCCCTCCACCCCACGCACC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:4abf8a7dcd73
|
40 | — | — | — |
|
CTAACCCGTCCATTGGTACATCCGCCGCACTTCCGCCCTA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:dcc45824935a
|
40 | — | — | — |
|
TCTGACTTCCGTTTTTCTCCCTCCTGAATTTACGACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:afa411b4a190
|
40 | — | — | — |
|
ACCGTACTTCCGGCCCCTACACGCCTCACTTCCGTTACTT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:74ebbf1af289
|
40 | — | — | — |
|
CCCCGCCGTCCGAACCGGAAGTGCCAATTGAGCATTGCGG
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:c41fdd64cacc
|
40 | — | — | — |
|
TTTCCGCTTCCGTATATCGTAAAATCTACGCCCCGCACTC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:3050b890f2ea
|
40 | — | — | — |
|
GCCGCTCAAGGAGTTCCGGTTATGAGCTATTCTTCCGGTA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:b7b3e5af9668
|
40 | — | — | — |
|
GCCGATGCCATCCGGTCAGCGCGCCGGAAGCCCAAATATC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:a5c3fbc2a346
|
40 | — | — | — |
|
GACACTTAGACTTCCGGCGGCATTAGACGACCGGATATCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:4410efe33e99
|
40 | — | — | — |
|
TCCGGTCCCAACACCCCACCGGAAGTCCCACCCAGTTCCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:d213434fa1f0
|
40 | — | — | — |
|
TACTTCCGGTTTCCGGTCACGTGCGCGAGCTACCGGATTA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:d8e8305a4064
|
40 | — | — | — |
|
GTTTACGACTTCCGCCTTGTCATTTCCGCCAGTTCTCCAC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:342e143c6e4a
|
40 | — | — | — |
|
TTAACGACTTCCGGTTCCGATTCCCACCCTCGTCACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:461ad832235d
|
40 | — | — | — |
|
TCCGGTATTGTATGTTCCAACCCCCTTTTTTACGACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:1068f509ac94
|
40 | — | — | — |
|
TCATTTCCGCTTTTTTACGACTTCCGCTACCATCCCTCTC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:d42d26396b18
|
40 | — | — | — |
|
ACCGGAAGTTCGCATGCACTTGACGCATTTACATTTGTAC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:a6530f859da3
|
40 | — | — | — |
|
TCCGCGATTTAACGACTTCCTGTCTTCAGTTCCGGTTTAA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:66b2ebec3872
|
40 | — | — | — |
|
CGACTACTTCCGGTTCACGTATTTTTTAACGACCTCCTTT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:e6f956bd4dfe
|
40 | — | — | — |
|
CCTGACACACTCCCTCCAACCATGCCCCACCGCCCTCCCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:63e3ae1e67be
|
40 | — | — | — |
|
CTCAACATTTACGACTTCCGGAAACGTCCTTTGCGGCTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:4c4ae41e9189
|
40 | — | — | — |
|
GCCACTTCCGTTTGTCGTAAAAAACCACTAGCCCGACGAG
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:356de522b6c2
|
40 | — | — | — |
|
TCCCGTATAGTTTACGACTTCCGGTTGCTACCCGCCGGTT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:a3c9728a03f5
|
40 | — | — | — |
|
CGGAAGACCCCTTGCCGACACTAAATATGCCTCGCCCATA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:a535def65b64
|
40 | — | — | — |
|
CCCCACCACACCACCGCCCCGCCCGACCGCCCATGGATCA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:0898db698723
|
40 | — | — | — |
|
CTTTATGACAATCGGAAGTCCTATGTACGTGCTTCCGCCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:7af94a3efb81
|
40 | — | — | — |
|
ACCCTCATTAACGACTTCCGGTTCGCTAGCGTAACGCACC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:f789471de61f
|
40 | — | — | — |
|
GGTCCGATTACAGCTCCAGCCTTCTGTTCCGGAACCGGAA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:712a79d6bbfb
|
40 | — | — | — |
|
GCCAACTTCCCTTAAATGAACGTAAGTACATTTCCGGTGT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:8e73b60ba2be
|
40 | — | — | — |
|
TTCCGCCCTCCCTCCCCAAGACCCGCGCTCCGACGCGACC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:1fa0aa76c0a6
|
40 | — | — | — |
|
CCTTACCACACCCTAACTTCCGGTCCTAGCACTTCCTTCT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:59da9708a4cf
|
40 | — | — | — |
|
TCCGGCACGGAACCACTCTATGCACCGGAAGTCGTAAAGC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:758d75c5a970
|
40 | — | — | — |
|
CCGGAAGTCGTAAAACCCTTCCACTGCCCTCATTCGGAGG
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:6574f6efe098
|
40 | — | — | — |
|
CCCGTTCCCTTTTTACGACTTCCGGTCTTACTCTCCTTCG
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:9370544df219
|
40 | — | — | — |
|
CCTTCCTGTCCCCATCCCACCACGTTCTCCCAACTTCCGC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:bf0178738250
|
40 | — | — | — |
|
CGACACCATCTCATTTCCTGCCCCCTTTTTTACGACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:803f34d3be6f
|
40 | — | — | — |
|
CAGGCCGTAAGCGCACTTCCGGCTGGTCGCGTGTCCGCCA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:37f6cdb21b8a
|
40 | — | — | — |
|
GATCCATTTCCACCGTCCTCCCCTCCCCCACCCCGCACCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:61f622c19287
|
40 | — | — | — |
|
CCCTACGACATCCGCTTCCCGCCATCCGTCAGTTCCGGTA
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:c9ecb4004900
|
40 | — | — | — |
|
ACCGTGCTTCCGGCCGGACACATCACCCATTTCCTGTCAT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:27a7b0533ffb
|
40 | — | — | — |
|
TTCCGCCGGCACGTAGCCTCGGAACCACGCATCCGGTCCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:2c384095620a
|
40 | — | — | — |
|
ACGCCCTTCCCTCAGTACATCCGCAATTCCCTTACTCGTT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:f2fba96f7eee
|
40 | — | — | — |
|
GATGCTACGTCCCCTCCCGCCTACCGTTCCTCCCGTGCCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:779eb99c4421
|
40 | — | — | — |
|
ACTTCCTTCCGGTGCACTGCTGCCGTTACGCATTGCCCCT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:ee824463038c
|
40 | — | — | — |
|
CTTTACGACTTCCGGTTCGACGCACTCCGTTGCTTGTGAG
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:62c682242072
|
40 | — | — | — |
|
CCGGAAGTCGTAAAACGACCTACCGTCCGACAACAACCCT
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:60c258c242bb
|
40 | — | — | — |
|
GAGTTAAGTCCGATAAGCCATAGCTTCCGGCATTAACACC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:fa92cbf52671
|
40 | — | — | — |
|
CCGCGTTGCTGTTCGCCTTCCTACTTCCACTTGCACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:2fa7dbdf7941
|
40 | — | — | — |
|
CGCCGATTTACGACCCAACATATATCCGGCGTCCACTTCC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:5e5f1816a793
|
40 | — | — | — |
|
AAGACAAACGCCGGAAACACGTCACTACCCACTTCCGCTC
PANAPTA:Q06546:GABPA_HOXC11:PRJEB66722:R3:46e29d472762
|
40 | — | — | — |
SELEX rounds
R3 ·final