GABPA_HOXD10
CAP-SELEX sample HOXD10_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCCGGTTCACCGACACGTCGTAAAAGAAGCAGGAAATGGG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:ef1e78bc1af4
|
40 | — | — | — |
|
TCCGTCGACTCTACGGGTTTTATGACTTCCGGCTGGCGCG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:af16282b97d6
|
40 | — | — | — |
|
TCCGCCGGATACCGCTGATGACTGTTTTACGACCATGTCT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:945083ec31c6
|
40 | — | — | — |
|
TTTACGAGGTCCGGAAACGCAGAGAAGGGCGGAAGTGGGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c6d8df992f72
|
40 | — | — | — |
|
GAATTTTACGATGGCGATTACCGGAAGCGGAAACGATATT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:f4c9390eead9
|
40 | — | — | — |
|
TCCGGTCAGACGTTGACTGGCTTGGAGGTCGTAAAACCTA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:9c39ff96c1ea
|
40 | — | — | — |
|
TCCGGTTCTCGTAAATCTGCCCTGCGCCGTTCAAACTGCG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:a4392c158965
|
40 | — | — | — |
|
AGCAGCACCGGAAGTCGTAAAATAGCAGTTCGTCAGAACA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:fb54ee6bf577
|
40 | — | — | — |
|
TCCGGCGGAAGCGCGAAGCACGAACTTTTATTATGCGTGA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c6900e2da0a8
|
40 | — | — | — |
|
TCCGGTTGCAAGTCTTGCGGAATTGCACAGGAAGTCGTAA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:e2c2bd8e832f
|
40 | — | — | — |
|
TCCGTAAGACACCGGAAGTCATAAAAACGTAGTAATATCT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:5061d338255c
|
40 | — | — | — |
|
TCCGGGCTGAGATTTACGACCGGATGTCAGGAACCGGAAA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:dd009455b97c
|
40 | — | — | — |
|
ACTCTGACACTCACCAGTAACTTTTTACGACTTCCGGTTG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:b8c61c404878
|
40 | — | — | — |
|
CGTCAGTTTACGACTTCCGGTTACTTCCGCCGTAAACACT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:9a14a1aef4d6
|
40 | — | — | — |
|
TCCGGTTCCGGCTTAATACGAATACTACTCCTGTTTTACG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:0b7e235e9a3a
|
40 | — | — | — |
|
TCCGGCGGAAGTGCGTTTGCTAGAGGGCGAGGATTTTATT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:9f9d50a2caf8
|
40 | — | — | — |
|
TCCGGTCGCGTACGTAGGCGAAGCCGGAAGAATTTTTACG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:1847d6e12a3c
|
40 | — | — | — |
|
TAGCGCATAAAACAGTAACGACCTACTTCCGCCGGAAGGA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:1b466d0bdc6a
|
40 | — | — | — |
|
TCCGGTTGCATAACTGACAAGTCGTAAATCGTAAAATGGA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c7bff575ed2e
|
40 | — | — | — |
|
TCCGGTTCCGGAGGGCTAGTTTTATTACCCTCACCGGGTT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:9742944f0573
|
40 | — | — | — |
|
TCCGGCGGAACTCGTAACATTATGTAGCATTTTACGACAG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:2561a394f0ac
|
40 | — | — | — |
|
TCGACAGACGTTGCGTACCGTAAACGCAGCTTCCGGTACC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:faad27978b89
|
40 | — | — | — |
|
TCCGGTCACTTAACGACAGGTCGTTAAACAGATCAACAGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:f7e2f9226b0e
|
40 | — | — | — |
|
TCCGGTCTGCCCTTGGACTTGCACGTTAGCCCGGAAGCAG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:d05cedfbc0d0
|
40 | — | — | — |
|
TTGACAACGACCGGAAATGCATTTGCCGGTCGTGCGCGTT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:ae15c832ed0e
|
40 | — | — | — |
|
TCCGGATCTCGTAAAATCGTAAGTACCTGCACGCGATTTA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:65b49b5d4385
|
40 | — | — | — |
|
TCCGGTAATAAAAAAGGCATTTCCTGCGCTGCATATAACA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:838662e8110f
|
40 | — | — | — |
|
TCCGCCGGATATTAGCGCGTGGACCGGATCATAAAACACC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c7ce6891ddd5
|
40 | — | — | — |
|
TCCGGTCCGGCATTTTACGATGCGGAAATTGGCTAATTTT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c4d4fdf92070
|
40 | — | — | — |
|
TCCGGTGGCTATTGAAAAGTCGTAAAACCTGATTGCACTC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:47c5a6919c25
|
40 | — | — | — |
|
TCCGGTAATAAAACACAACTGTCAAACATACTTAGCGACC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:e459231b19e5
|
40 | — | — | — |
|
TCCGCTAACCATCAGTCGTAAACCCCACCGGAAGCACAAT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:1f1cca31e624
|
40 | — | — | — |
|
TCCGGTCACGCTCATTTTTACGATGCCTTACATCATCGAT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:ecfd9b6a7ab3
|
40 | — | — | — |
|
TTTACGACCCTACTAACGCGTGGCGATATCCGTTTCCGGA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:70fe75fecbbc
|
40 | — | — | — |
|
CCCACACATTTCCGGTGAAACACCGATAAATTCCATGCGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c574c6009738
|
40 | — | — | — |
|
TCCGGTCTTGTTGACGCACTAAGACTATAAATCCCGACAC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:a76ff8c0aaa6
|
40 | — | — | — |
|
TCCGGTACGTGGGCAGTATAAAGACGAACTAAGTCGTAAA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:8f0151ba0f87
|
40 | — | — | — |
|
TCCGGTAGCGACGAGTTCCGATTACGCTTTTATGACCACT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:b7e2b40f4f53
|
40 | — | — | — |
|
AATGCGTTTTGCCTGTATACCGGAAGTAGGTCATTAACGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:24c5d4a525fe
|
40 | — | — | — |
|
CCTAAATTGGCCGGAAGTGTTGACTTACGGTTGTTATTGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:7efa76db6d5d
|
40 | — | — | — |
|
TCCGCCGGAACCACATTAAACGAGTTTTATAGCTGTGTTC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:0ea6996e605e
|
40 | — | — | — |
|
TCCGGTCCAAGGTGCTTCCGACGGTCGTTAACTGAGTCCT
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:b370d56bf20f
|
40 | — | — | — |
|
TCCGGTGCCGCAAATTAATGACCCTGCTTAATTAGGTCGA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:e457f9d7bf76
|
40 | — | — | — |
|
GATCCGGAAGTAATAAAAATAGCAGATCCGGAAGCAGGGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:136b57226a42
|
40 | — | — | — |
|
TCCGGTTCCGGGTGGGACAGTTAACCTTAACGACCTCCCC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:c393ea3c4877
|
40 | — | — | — |
|
TCCGGAAGCAATAAAATGCTTTCCGTTTTTTCTAACGCAC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:815affb91ea9
|
40 | — | — | — |
|
GCGGAGAACACCATTTCCGGTGCACTTTATTATCCGGTCC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:0670d7b1110a
|
40 | — | — | — |
|
TCCGGTTACCGGATTATTACTGCGCATTTTACGACTTCGC
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:9aa4ee0200d3
|
40 | — | — | — |
|
TCCGGTCGCGCTGGCATAGAGCCGACGTCGTAAAACAGTA
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:0a59828f8c94
|
40 | — | — | — |
|
TCCGGTACAGCACCGGGTAACGATGCAACGTGCGTTTACG
PANAPTA:Q06546:GABPA_HOXD10:PRJEB66722:R3:2fcfcbf5d822
|
40 | — | — | — |
SELEX rounds
R3 ·final