GABPA_HOXD12
CAP-SELEX sample HOXD12_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TAGTTGGCCAGCTTCCGGTGCTCTACCGGAAGTTGCCGTT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:18f6428ae4e4
|
40 | — | — | — |
|
CCTCGCCCCCTGCTCGTCCCTCTCCGCTCCATCTACCACC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:78ee43bc4a4f
|
40 | — | — | — |
|
CCCCCGCTCCCACCGCTTCCCGTCTCGCCTACCCACCGCT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:ded4644711a1
|
40 | — | — | — |
|
GTAGGGTGATCTGCATTCCGCTGAAGTGTCCACTTACGGA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:ccf9a59c7cfb
|
40 | — | — | — |
|
CGTCACTTCCGGTTTGTGCCCCTTTTACTGCGACCACTCC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:8ec07180e0b4
|
40 | — | — | — |
|
ACCCTCACTTCCTGCTGTCGCCATGCTACTTCCTTCCGAG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:3a4378f0dcc2
|
40 | — | — | — |
|
CATCACCGTCCGTACACCTTCCGCTTTCCCCGGTAACCGC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:f691fc83d466
|
40 | — | — | — |
|
TGTTTCGATGAATGGTGAAAGCTATCTTGAATTAGGACCC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:b4ee86ba16cd
|
40 | — | — | — |
|
CCTGCTCCTTTCGCTCATTACCGCACAGGCACCTCTCCTC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:b054f56946ba
|
40 | — | — | — |
|
GTCCGTTTCCGGCCTGGTGACGCCCACTTCCGTTCCTGCT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:03d56c824094
|
40 | — | — | — |
|
TGTGGAATGTTGGAGGGTGGTACGAGGCCGATTGTAAATA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:66f35df3e17d
|
40 | — | — | — |
|
CTCCGGACGTCCATACTTACTGAGCCTGTCCCGCCAACCT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:4777344b161a
|
40 | — | — | — |
|
CGCCCCCCTTAGCACCATCTCCCTCGTCCGGTCTAAAGCG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:d9ad7d7a72f4
|
40 | — | — | — |
|
TGATGTCTTCCGCCCAATGTTGTCTACTTCCGTTTGGAGC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:65bbbe4ddf3d
|
40 | — | — | — |
|
TCACTTACCCACCAACCGTAAACGCGTTTCCGGTTGAACG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:3ab0cac6f78e
|
40 | — | — | — |
|
CCCTGGTTCCCGTAAATTGGTGAGGCATTTCCGGTCGTCA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:b0164f2b36b2
|
40 | — | — | — |
|
CCGGAACTCACACCTTTGTGCTCCATTTCCGTCTCGCTGC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:100d07c080d5
|
40 | — | — | — |
|
CACATCCCGTGCCCCGACGGACGAGCACACCAATGGGCCC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:6b956fbd22b2
|
40 | — | — | — |
|
GCCCTGTCGTCCCGTTGTTCCCTCTTCCTGTATCCGTATG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:9fc197d0a8c8
|
40 | — | — | — |
|
TCAATTAGCCGGATGTCATTATGGCACACGGAAGTAGTGG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:2d66acd1fcb0
|
40 | — | — | — |
|
TTCCGCTGCACCACCGCGCTGACTTCTCGCCTTGAATCGC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:0f744fcf31d3
|
40 | — | — | — |
|
TATTCGACTGTATGCACTTCCGGTTAATCATTAACACACC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:f875a32d0c65
|
40 | — | — | — |
|
CCGGAACTTCCGGCTTCGGCGTACCTATTAACCACCCGCT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:6d8a3b595f98
|
40 | — | — | — |
|
TAATACCGTATGTTGCAGGGGCCGATTGACATCCGGTTTC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:fc925af2f8f2
|
40 | — | — | — |
|
TGATACTCGCCGAACTTGTGGGAACTTCCGCTTTCGTACG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:4de46efb1c4d
|
40 | — | — | — |
|
CCCGACCATCCTGCTAGGACTGCTACACCCTTCCCCCAAC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:a039df62170e
|
40 | — | — | — |
|
CATGCCGTACACATCCGGTCACCGCGATCGACCGGATGTG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:b41624252b17
|
40 | — | — | — |
|
CCATCGATCCCGCCACCCTCGCACCTTTAGTCTCCCTTTA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:8e31b85c9191
|
40 | — | — | — |
|
CCGGACGCCCGCGCACTTCCGGTCCCAATAGGCCGCGGTA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:f2e23e0942ba
|
40 | — | — | — |
|
GGTGTGCGCCCCCGCCCTCCTCCCATCCCACGACACCCAC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:c79d1525d029
|
40 | — | — | — |
|
CGTTGGCCCTTAATTCACTCCCGGTATAACATCGCGAGTG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:8c4cd94030da
|
40 | — | — | — |
|
GACTGTACTTTGCCTATTTGCTAGAAACATCGTTTTACTT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:6b72bd67c9e6
|
40 | — | — | — |
|
TTTCTGCGTTATATTGCCGGATATCTTTCCCGACCGGAAG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:3df88a111db3
|
40 | — | — | — |
|
CCCCATTCCTCCCGCCAGTGTACCCCATGCCTTACTCACC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:1cac0e5afd50
|
40 | — | — | — |
|
GATATCCGGTGCCGGAGTACCGTATATGGTGTTTGGTGGG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:5304a8dbf502
|
40 | — | — | — |
|
CGCCTCTAGTCCCCTCGGTCCGCCTACGACCCATTCACCC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:c186b67c71d4
|
40 | — | — | — |
|
TTAGCGTGTCTGTGCCTTTCGGCTACTTCCGGTTTGACTC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:ea35e80c3ed4
|
40 | — | — | — |
|
ACCGGCGGACATGACCCCACCATTTCCGTACTAGCACCGG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:0167917fc89c
|
40 | — | — | — |
|
TCGCTCTCATGTCGGTGGTCCATTGCTGCCGGAAGCGCTC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:49863a3dfe5c
|
40 | — | — | — |
|
GACGCCGGACGTGCCCTGGCGACTTACGGGGATCCGATGC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:715f511a9953
|
40 | — | — | — |
|
CCCAGTCTACCCGTAACCACGATTTGTTTCCGCGTCCGCT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:4801479abf43
|
40 | — | — | — |
|
CTTCGAAGCCAGTGCTAGCAATGATGGATTCAGGGCGGAG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:fe28441004d1
|
40 | — | — | — |
|
TTTCCGGCCCGGCAGCCCCACCTGCCCATCCAGTGCGCGT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:13741ccdd71f
|
40 | — | — | — |
|
CAACCCAGCGAACTCGCCGGAAACAGGGATTTCCGGCGGT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:ed4fc5a6367a
|
40 | — | — | — |
|
ACACCGTCTGCGCCCACTCATTCCCTGTTTTCCCTTAATC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:d18a1e4168ee
|
40 | — | — | — |
|
CCTGACCTGCCATCTTTCCGTCGCGTGCCAGCTTCCGCTC
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:318189329f39
|
40 | — | — | — |
|
GTGGCGTAATTGGCACGTAAGTCTGAGCTACTTCCGGCGA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:6ef2d76c525c
|
40 | — | — | — |
|
AAGCATGTGAGGGCGGAAGTGCAAACAGCTTCCGTTGTGA
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:84127dab3a62
|
40 | — | — | — |
|
GCTTCCACACGCTTTTCCGTGTATCCTTACCTATGCTCGT
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:0c477214076f
|
40 | — | — | — |
|
AGCCCCCGCGTTTCCTTGCCACATCGACCGGAAGTGAGTG
PANAPTA:Q06546:GABPA_HOXD12:PRJEB66722:R3:700da7fa2780
|
40 | — | — | — |
SELEX rounds
R3 ·final