GABPA_HOXD3
CAP-SELEX sample HOXD3_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCCACCGCTATAACCGTAAGCAGCCGCTTCCGGTTGACCG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:2442977c9a68
|
40 | — | — | — |
|
GAAACGAGCCGCGACCGATATGTGCGCACATCCGGTCTCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:dea600a083ad
|
40 | — | — | — |
|
ATACTTCCGGTAAACAGCACCGGAAGTCGTACCCCCTCGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:8653061efb0c
|
40 | — | — | — |
|
CGGACCCGTAAGTTCAGAAACATTCCGGTTCTTACCAAGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:18afc19ada1f
|
40 | — | — | — |
|
ATATCTTACAACCGGAAGTTACACTAACTTAACGCGTTGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:dd245bfb0208
|
40 | — | — | — |
|
CATCAGTCATTTCCGTCCTCCGGCGGAAATCACGCCGATC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:5644d6172d66
|
40 | — | — | — |
|
TGATCGTGAGGATGCCACGCGATAAACACGTTTCCGGTGA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:bc590c2d7af9
|
40 | — | — | — |
|
CCACGAACCGGAAATCTATTTCCGGATGAGTATCGAGGAC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:7e78dbd9c155
|
40 | — | — | — |
|
ATCGTAACCGTATATCGAATATCCGGTTCGGTAACGTCCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:31db51f6ce45
|
40 | — | — | — |
|
ATTGTGGTCCGAACCGGAAATTCGCACTTCCGGTGACACT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:c58dcb7e1521
|
40 | — | — | — |
|
GATTTCCAGTTCCGGTCCTACGACAGGCCCGCTAACTGGA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:c229c375f25d
|
40 | — | — | — |
|
CTACCTGCCACTTCCGTGCTCTCGCCGGAAGTGCGCGGCG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:3d3063cc9bd0
|
40 | — | — | — |
|
CATCGCTATGTCCGGTACTGATTACCGTAAATTCGCAAGT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:e8d4c64ab7f0
|
40 | — | — | — |
|
GCACCGAGCCGTAAGCCCGCTTCCGGCCCCTCGCGCACGT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:7da2426a83ef
|
40 | — | — | — |
|
CCGCGGCCGGAAGTCATTACCGCTTGACTTCCGTCACCGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:3f73c120df49
|
40 | — | — | — |
|
TGAGCCGTTAAGTATCCTGGTACTTCCGGTAACGGTGCGA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:01e66fd386b2
|
40 | — | — | — |
|
CCATACCGGGCAACCTCCGTTAAGTAGGACTTCCGGAAGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:bf4333fc2f99
|
40 | — | — | — |
|
TTGTCATTTCCGGTCCAAACCATCGACCGGAAGTGTCCCG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:066eebfe3a86
|
40 | — | — | — |
|
GCGGAAGTACACTTCCGGTTTCCGCGTGAAACGTCCAGCC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:c9aa70fffe84
|
40 | — | — | — |
|
AACTTCCGGCTTGCACACGCCGTAAGTAAAACTCACTACT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:2deb0c0cf940
|
40 | — | — | — |
|
CGCGCTCAATACCGGTAAGATGCCTCTTCCGGTCTAGACC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:1218f3ef8247
|
40 | — | — | — |
|
AATACACACGGAAGCTCGCTTCCGGTGATACACACTATTT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:b8bbdf037d63
|
40 | — | — | — |
|
CCCTAATTGCCGTAAGTAACTACTTCCGGCGACACACTTC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:5e25d73b9959
|
40 | — | — | — |
|
TGAGATCAGCTTCGGGTTAGACCGGAAGCTTGATGCGATT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:db5b8ab24ecb
|
40 | — | — | — |
|
CCAGGACCGGAAACGTATTTCCGGTCCTGTGTTGCCAATC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:a2dc02e64bfb
|
40 | — | — | — |
|
ACCGGAAGTCTACCATTAATGACGCACCACTTCCGGTCCC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:acd517e0906b
|
40 | — | — | — |
|
TGCTAATTGCTTCCGGCATCTGACATCCGGTTTGGCCCTC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:aea3499fd2cd
|
40 | — | — | — |
|
CTCACTGACTTCCGTCGGTGACGTAAGTTGGTCTATGCCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:6dad4c761ef2
|
40 | — | — | — |
|
GGCCCGCCGGATGTAATGACTTACGGCGCATCACTGCACG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:4288d7dee9ff
|
40 | — | — | — |
|
CCGAAGCCGCTAATTACTTCCGGTCAAACTTCCGGTTCCT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:f033fbb16f86
|
40 | — | — | — |
|
GACCTAGGCACGTCCGGAGCCTTTCCGTAAGTGTCACCAT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:f612af6e066f
|
40 | — | — | — |
|
GCCTGTTGGCCAACGCTCGTTCCGTAAACTCGTTTCCGGA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:65d721b2b66f
|
40 | — | — | — |
|
TTTTCCGGAAATCTACTAATTTACGGAGACAGGAAGCACC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:4cae2b8abd1f
|
40 | — | — | — |
|
TGCCACACCCGAAATGCAGCCATTTCCGGCGGAACACGCT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:2640e6cd0ced
|
40 | — | — | — |
|
ACACCGTAAGTGACACTTCCGGCCGCGGCGACCCGGTTAG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:90ae4839ba8d
|
40 | — | — | — |
|
CTTGAACCGGACGTTAGTGCAATTTCCGGTTCACCGTCTT
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:a724a15a0f6c
|
40 | — | — | — |
|
CTTATTACTTCCGGTATCTTCCCTTACCGGAAGTGGCCGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:f78968dd892c
|
40 | — | — | — |
|
CTTCAGGTTCTACCGGATGTTCACATACGGTACCCCCCCC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:c7f7040bd1ed
|
40 | — | — | — |
|
TACCGGAAACATCGCACTAATGACTTCCGATCAACAATGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:e6661e924a20
|
40 | — | — | — |
|
CATCGTCACTTCCGCCGTTATGATTAACCGGACGTGACCG
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:1c144ef2d373
|
40 | — | — | — |
|
GCCATTGCAAATACTTCCGCGTTCTACCGGATGTTGGTCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:fbc414c52f42
|
40 | — | — | — |
|
TGCTAGTGCCTTCCGGTCCCCGCCCGATAAGTCATAGGCC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:329c6811c972
|
40 | — | — | — |
|
ATGTCACTTCCGGTCAAGGTCCGAGGCTAAGTGCCATGAA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:35f16800cba6
|
40 | — | — | — |
|
TAACCTTCCGGTACGTAACTCCCTCGAGACCGGAAGGAAC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:0a78463ba411
|
40 | — | — | — |
|
CAGTTACGGTACACAAGCCGGAACTCAACCGTTTCCCCCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:781a3a26126a
|
40 | — | — | — |
|
GCAGGATCCTGCTTCCGGTCCCACAACCGTAAGCTCGCAA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:5b0150882e50
|
40 | — | — | — |
|
AACACTCCTACCGGAAGTCATTTAGACTTACCGGGCAGCC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:9b49e2ea9972
|
40 | — | — | — |
|
CTCGACCGGATGTAAACATCCGGTTACTCCTACTTCCTCA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:a002ddfb8847
|
40 | — | — | — |
|
GCTGCTACTTCCTGCCTGGCCGGAAGTTGACGCGCCACTA
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:4e470876ad9c
|
40 | — | — | — |
|
CCTCACTTCCGTCAACCACCGGAAGTGACACCACGCAGGC
PANAPTA:Q06546:GABPA_HOXD3:PRJEB66722:R3:aec1bf2f12c1
|
40 | — | — | — |
SELEX rounds
R3 ·final