GABPA_IRF8
CAP-SELEX sample IRF8_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TGTGAACTTCCGGTGATACCGAAAGTAGCCATACTACAGT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:ed48f892234b
|
40 | — | — | — |
|
AGTGTTACGCTTCCGGTGCGAAACCAAAACCACGTGAAAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:a6c2218f9ec9
|
40 | — | — | — |
|
CGAGTTACTTCCGGTGCCAAAACGAAACTAGGTTCATTCT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:5ad3698eec34
|
40 | — | — | — |
|
ACGAAACCGGAAATGAGGTTGTGAAACATCACGTAAGCCG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:b70ffe097658
|
40 | — | — | — |
|
TCGACACCGGAAGTTACAGAACGGAAACGAAAGTACGAAT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:7a32628c043d
|
40 | — | — | — |
|
TTGACTACTTCCGGAGCGAAACCGAAAATGCGGGAATTGG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:5322f944d046
|
40 | — | — | — |
|
AGCACCTCACACACCGGAAGCGAAACCGGAAACGATCAAT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:de07dae7a457
|
40 | — | — | — |
|
CACTATTTCCGTCCTGCGTGAAAGCGAAACTAGTTAGTTG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:6c8d6372e56b
|
40 | — | — | — |
|
CCCAACATCCGGTTAGCAACCGAAACCCAGCCTCAATTTA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:1b3432f18ce1
|
40 | — | — | — |
|
GAATAGTAGCGGATGATGTGTTTCGCTTTCCAACCGGAAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:d63f87b77172
|
40 | — | — | — |
|
GTCGTGTAGTAACTGCGAGACCTGAAACCGGAAACGAAAC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:2432a4a57d27
|
40 | — | — | — |
|
CCAGCCGGAAGTGAAACCGCTTGCGTTACCTGTGCACTTC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:bb5445809a2e
|
40 | — | — | — |
|
AAACTGTACTTCCGGCTCAATCGAAACCGATACCGGGATA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:bb1e01f62fbd
|
40 | — | — | — |
|
GCTCCACTTCCGCTAGGAACGAAACTGAAAGCCCTTCGCA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:13c13b2ec225
|
40 | — | — | — |
|
TAAACCGGAAGTAGTGCACTATAGATACCGAAACCACATA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:d93dfd40791e
|
40 | — | — | — |
|
CACCCACAAGTGAAACCGCGCCAAGCTCTCACACCGGAAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:c4bb0b66e143
|
40 | — | — | — |
|
GGCTTAAACGGCATTGAAACCGGAAGTGAAACCTAAACCA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:245a30e54668
|
40 | — | — | — |
|
ACCGCTATTTCCGGTACTAACGAGACTATTTTCGTGGTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:d9d11c4317b0
|
40 | — | — | — |
|
TCCCGACCTCCGACCGAACCTGAAACCGGAAGCCAACTTC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:b09f5887ac10
|
40 | — | — | — |
|
CGATCACCGGAAGTCACAGTACTTACGGTTTCTAAGACAG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:c86d5a9cce48
|
40 | — | — | — |
|
CCGGAAATGAATCAAACAGGAAGCGCGGAAACGAAAGTAT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:ca566454da10
|
40 | — | — | — |
|
CACCGCGCAATATCCGGCGAAACTGAGAATTGTCTCCATC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:32f159d80900
|
40 | — | — | — |
|
TGAGCGAAACCGAAAACCGGCATACCTCCATTTCCGGTAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:a6af0cfbe356
|
40 | — | — | — |
|
TACCGGAAGTGAACTTCCTGTATGGTTTATTGTGCCCACG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:0f0ed693d3d7
|
40 | — | — | — |
|
CGAAACTGGTATATTAGTTTCATTAGGAAGCGGAAGCATC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:4c4d6db49f4a
|
40 | — | — | — |
|
CGCAACCGGAAGTGAGAACGAAACCACAACCTGCGCAGAG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:dbb0736aba0d
|
40 | — | — | — |
|
CTGCGCTTCCGCTGAAACCGAAACTAACTCGTCTTACGTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:6b0335221c82
|
40 | — | — | — |
|
CGGAGAACGGAAGTAAGGTTGTGTGACGTGGTATCACTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:32bf93f4b9d1
|
40 | — | — | — |
|
TGAACCGACTCTGACCTGCACGAAGTTTCACATCCGGTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:96d777832deb
|
40 | — | — | — |
|
CCGGAAATGCGATATTTACGGGATGGCGAAACGTGCGTTG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:c30c624935e1
|
40 | — | — | — |
|
GGTGCGCACAGGAAGTGAAACTGACGCTAGGCGTTACTTC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:029d03ecf485
|
40 | — | — | — |
|
CCGCTTCCGTTCCACTCGCACCAGCCGGAAACAGTACTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:b53a1a1c10d3
|
40 | — | — | — |
|
TGGAACCGCCTCATGCCAGCGGAAGTGATACTTTCGTTTC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:b803612244c8
|
40 | — | — | — |
|
CGGAAGTGGCAGGTACGAAACCGAAACGAAAGCATCTTAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:3f0f6d26915d
|
40 | — | — | — |
|
CACGAAACCGAAACTGACACATACTACTAACCACAACCTA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:2adfb3652fe7
|
40 | — | — | — |
|
CGCGTACCAGATCGAAATCCCTGTGTTTCGCTTCCTGTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:1d94eda47a79
|
40 | — | — | — |
|
GGGGAAACCGAAACACACAACCGGAAGGTAAGGCGATTTC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:77c76d53d335
|
40 | — | — | — |
|
TGCCAGACCGTAAAACCTTTTCCGGTCCGTTACCCAGCCA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:0722e1269b3e
|
40 | — | — | — |
|
CCCTCGAAACCACGCCCCCACGTCATACCGGAAGCGGAAC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:6903f8b6fe82
|
40 | — | — | — |
|
TGAGCGAAACCGTTCACATAGTTTCGTTTACCACGTCCAA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:4f5c85b7cd32
|
40 | — | — | — |
|
GCGGAAGTTGCTCACGAAAGCGAAACGAGGATCTAACTCG
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:c4ab0e14d6f2
|
40 | — | — | — |
|
CACATCACTTCCGGGGTGATCCTACGCTTAGAATCGCTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:b541bcfcc8fe
|
40 | — | — | — |
|
GCAATGGCGAAACGCGATGAGACGTTGCCGCTTCCGGTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:fcd5373ed292
|
40 | — | — | — |
|
AACGAAACCGGAAGTTCCGTTTCGGTAGACCAAATGTGTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:9f71709b6e41
|
40 | — | — | — |
|
AGTCTTGCCGGAAGTATAACAAACGCGAAACCGAAACTGA
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:f0e1133477a0
|
40 | — | — | — |
|
CTTACTACTTCCGACGGATACGAAACCAAACAAGGTGTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:8c157cf43374
|
40 | — | — | — |
|
TCGTGGATAATTTCCGGTTCGAAAATGAAAGTGATGATGC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:9c3432d7df42
|
40 | — | — | — |
|
CCGGAAGTGTCATAAACCACGATACCGAAAGTAGCATAAC
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:9ea97a0b7cd1
|
40 | — | — | — |
|
CCCCATGACCGAAACCGGAAGTGCCAACAAACGATACTTT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:bd6c8c2a17b1
|
40 | — | — | — |
|
CCGCATCTCTGTGCTCCGACTTCCGTCGAAACCGAAACGT
PANAPTA:Q06546:GABPA_IRF8:PRJEB66722:R3:e6e17d985fab
|
40 | — | — | — |
SELEX rounds
R3 ·final