GABPA_LMX1A
CAP-SELEX sample LMX1A_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGGAAATATAATGATAGTGTTAACGTTTTAATTTCCGTCC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:99c8dbbeeee3
|
40 | — | — | — |
|
CGGAAATTGGTTTCACGCGTACCCAATTTCTGTACACACG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:e77a4f1c01a6
|
40 | — | — | — |
|
CGGAAATTGTAGTGGCCAAAGAACACAATTTCCGTAGCGG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:883c0943d612
|
40 | — | — | — |
|
CGGAAATGACCTGCATCCCCCATCCTGCGTCATTTCCGAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:19055bdbef5c
|
40 | — | — | — |
|
CGGAAATTAATGCTACACTTCCGGCGTGCACGTGCTCACT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:435c036eacce
|
40 | — | — | — |
|
CGGAAATTGAGCCTAAGAGTCCAATTTCCGTGCAGCACCC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:c17c3479d8ea
|
40 | — | — | — |
|
GCACAACCTAATTTCCGGTTGTCACGTCCCGGAAATATGC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:0041c8e92027
|
40 | — | — | — |
|
CACTGCACTTACGGTGTGCACCGGAAGTGTCGTGCGCTTT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:6808d0e44b17
|
40 | — | — | — |
|
CGGAAATTCGTTCCCTGGCCGGAAATTGCGTGTCCGCTCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:ce5b232cb330
|
40 | — | — | — |
|
CACTCCGGAAATTGTTAAGGGTCCATTTCCGGCGATTCGC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:936d083eff80
|
40 | — | — | — |
|
CGGAAATTGGTACATCTGTAACAATTTCCGACGGTCGATA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:6cef4e114824
|
40 | — | — | — |
|
CGGAAATTCCTCCTCCAACCTGTAATTTCCGCTGGTCAAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:193fbcbeb54b
|
40 | — | — | — |
|
CGGAAATTGCTCACTAAGGTTGCTTAATTTCCGTCCACCT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:126cb66a6ee8
|
40 | — | — | — |
|
GGAAATTGCACTGGTGATGCAATTTCCGGTAGGACACTCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:1e9c96918caf
|
40 | — | — | — |
|
CGGAAATGTACACTGCCCATTTCCTGTTAATCCCAAATTT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:6a2d609ca212
|
40 | — | — | — |
|
CGGAAATTGCCCAATTATGCACGTAATTGCGTGACGGTGC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:9c610553a910
|
40 | — | — | — |
|
CCTCCCGCTCCCCACCCCCGAACGGATGCACCATGCAACC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:8eb5b378ab5e
|
40 | — | — | — |
|
ATAATCACCGACAAACCCGACTGCACCAAGTACCCATGAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:36101e434358
|
40 | — | — | — |
|
CGAGCAATTTCCGGTAACAGACTTTCCGACAAATTGCACT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:4e1a3aa285e8
|
40 | — | — | — |
|
CGGAAATCTAGAATTATTCGTATATCTAATTTCCGGGCGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:164c0b38b099
|
40 | — | — | — |
|
CAACCGGAACCGGAACCGGAAAGACCGTCACTTAATTACA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:20854a10f014
|
40 | — | — | — |
|
CGGAAGTAAACTGTACTTACGCCAATTCAAGGCATTAATT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:7fd035b0b0bf
|
40 | — | — | — |
|
AACCACGTGTACATTAATGGCAAACCTCCCGCTTCCGGAA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:4a7ab5a0b538
|
40 | — | — | — |
|
ATTTCCGGTTGGCTTCACATAATGACCGGAAATGACCACA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:30f0f672cb68
|
40 | — | — | — |
|
CCGCGAGGGAGAAAGCGTTTCCGGTGTTTCGGATACGATC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:297105b0587a
|
40 | — | — | — |
|
CGCAATTTCCGGTGGTACGGAAAAGAGCGGAAGTGATCAA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:41b9a708c98b
|
40 | — | — | — |
|
TGCGGTCACACAAGGCGGAAATGAGATAGACGCATTTCCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:6e0ec8db805c
|
40 | — | — | — |
|
CGGAAATTGCCTGGCCCAGCAGGTGCGATAAGGCGCGTGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:e5cfab517d54
|
40 | — | — | — |
|
AACGCGATAAATAAATTGATTTCCGGTAATGATATAGAAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:728283ef78ac
|
40 | — | — | — |
|
AGCGGAAATGGATGTGATGACATCAGCATTAGCATTTCCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:604472dc7dc7
|
40 | — | — | — |
|
ACTTCCTGTTTCTTGGCCGGAAATTGAGTTTTGCCGACAT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:886d8592217f
|
40 | — | — | — |
|
CGGAAATGGTCGAAAGTTCCATTTCCGCACAATCTTTGGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:910dadc8c79b
|
40 | — | — | — |
|
GCTACATACCGGAAACACCATACCACAGTTCCAGGATATT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:69d732a7027f
|
40 | — | — | — |
|
TTGATTTCAATTTAGCGTAGCGTGCCTCATTTCCGCTATA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:433145220726
|
40 | — | — | — |
|
CGGAAATTGGTATACGATTTGTGTAAATATCAATTTTCGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:926a9b6975a1
|
40 | — | — | — |
|
GCGACGGTACGTCCGGAAGTCATTAGAGCGCAGCTTGTGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:b48335c35132
|
40 | — | — | — |
|
CATTTCCGCTAAAGCACGATCATCATCGCAATATCCGGCC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:0f8a5db0c510
|
40 | — | — | — |
|
CCTACAGGCGCCACTTTCCGGAGTATCCGGAAGTGACTGT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:d72c34244cc9
|
40 | — | — | — |
|
GGTATACATTTCCGGTGGCCCCGTAAATGAACATGAATCA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:d99225a054ab
|
40 | — | — | — |
|
CGGAAGTACTCTACGTACTTACGGGTAATTGACTACCTTA
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:14ae817c0755
|
40 | — | — | — |
|
GCATTGAGACAATTTCCGGCTCGCGTTGCCGCGACTTCCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:cdd929626c05
|
40 | — | — | — |
|
TTCCGGACTGGTACCCTACTTCGTAATTTCCGCTCTGCTT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:15e0fc4b34ea
|
40 | — | — | — |
|
GCAATCCGAGCATAAATCGAGCATGGGTAGTACCCACGCT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:7d053465d134
|
40 | — | — | — |
|
GCAATAATACGTCAGCGGAAATGAACTTGCGTCATTTCCG
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:3c548215e867
|
40 | — | — | — |
|
ATAACGTCAGGCCGAGCCGCGACAGCGACAACACAACATT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:0cc8c910f62b
|
40 | — | — | — |
|
GCTACAGGCTTACCGGAAGTACATTGTACTTACGGCATGC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:3806f43df416
|
40 | — | — | — |
|
TAGCCCTCCGCACACAATTTCCTGCTCCTACCGGAAATAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:d25f8e808277
|
40 | — | — | — |
|
TGTTTATTTCCGTGGAGCCGCGCCTACCGGAAATGAGAAT
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:4326fa20223e
|
40 | — | — | — |
|
GTTCGGCACCGGAAGCAGTTTTTCATCAGTTTACGGTGCC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:35f622e32aa6
|
40 | — | — | — |
|
GCACTGTTTAATCTGCTTAAACCGGAAATTGCACACGCAC
PANAPTA:Q06546:GABPA_LMX1A:PRJEB66722:R3:a57b272d4d95
|
40 | — | — | — |
SELEX rounds
R3 ·final