GABPA_NANOG
CAP-SELEX sample NANOG_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTACACTTCCTGTGGCGGAGTGATTGACGGAAGTGTCGAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:91fb0178814d
|
40 | — | — | — |
|
TGACCGGAAACGCTTACACGGAAGTGGGTCATTAAGGACG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:ede806ee4c03
|
40 | — | — | — |
|
CACAGACAGCCATAGAGTCACATCCGGTGACCGGAACCCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:ab6749e49bb2
|
40 | — | — | — |
|
TGATCCTTTGGGCACAGGTAAATTCATTTCCTGTTAATAG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:64a89934e3fb
|
40 | — | — | — |
|
GATAGCTACTTCCGGTTACGAGACGGCAGGAATTAAAGTG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:332b4a69fd50
|
40 | — | — | — |
|
TGTTTTCCGCTTCCGGTGAACCTGTGGAAGGTCTTCCTCC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:db53698f91fe
|
40 | — | — | — |
|
CCGACCGACATCTAACCGGAAAATGGCAACTTCCGGATAT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:86d478e34ad0
|
40 | — | — | — |
|
CCGAAACTTCCGGTACATCCATCTCTCTGGAAACCGGACG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:0441fb96c4e4
|
40 | — | — | — |
|
CGGATGGCTTCCTTTTCAACTTGTTTCCGGTTATTCGTAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:35b2f0d0dd71
|
40 | — | — | — |
|
TGTTTACAGAACCGGAAGCATTTGATGGCTAGAGCCGGAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:a6f24d9b2fff
|
40 | — | — | — |
|
CCGCACCGGAACTGACGACACCTATTTCCTGTAGCTACTA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:01d343775f2d
|
40 | — | — | — |
|
GGAACTCAGCCCACTTCCGGTTTATGAACGTTAAGGCAGC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:3fb3cc52a2b9
|
40 | — | — | — |
|
ATTGATAGGCGGAAGCGACACAGAGAGCTGGCCACCGGAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:81e274aaabea
|
40 | — | — | — |
|
AACCGGAAGGTACAGCTACCTCCAAGACCGGATGTGAAGT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:a0792b5f7d1b
|
40 | — | — | — |
|
CAATGATCCAACTCACTTCCGGTGGATGCTGCCGTCAATA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:003a73591a06
|
40 | — | — | — |
|
CGTGTGAGAACTTCCGGTGTGGAGAACGCTCTAGCGGTGG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:f7e9a3e2e7a7
|
40 | — | — | — |
|
CACAATTTGGTCAACGTGATTTTCTGGACATCCGCCGGAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:76f64fe5dd80
|
40 | — | — | — |
|
CACAAAGCAAATAGCGCACCGTAAGGTCTCCTTCCGGTGA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:bc75bdc7e8ca
|
40 | — | — | — |
|
GCCAGGCACCACTCACTTCCGAGTTACACCGGAAGTACCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:5abf41432bc7
|
40 | — | — | — |
|
AACATCCGCCCTACCCCGGAAGTAACCACGTCATCCTGTA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:f6ef0b9cb006
|
40 | — | — | — |
|
GGTTGTAAACCGTAACACATTGTTCCGGTGTTAACATCAC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:4ce97dde5c57
|
40 | — | — | — |
|
CCGGAAGTTGGAACATAGGGCAAATCCTAGAGCTCGTGCC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:1877c7f5ec20
|
40 | — | — | — |
|
CCGTTTCCGGCAGAGCACGTAAATGACTAGTGACAGCCAC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:604f327a9577
|
40 | — | — | — |
|
TGCAATGCAACGGGAAGTGACACTTCCGGTTGAATGAGGG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:04d258dc90d4
|
40 | — | — | — |
|
GAGAGGCACCCACACCGGAAGTTGCTGAGGATGCACTGCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:a0bc342a04a7
|
40 | — | — | — |
|
GCTTGACCGGATGTGTACTTACGGTGTCAACTACTCCATT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:421c5ce7290b
|
40 | — | — | — |
|
TTGTACGACCGTATATGCGATATCCGGTGCGACAGCTGAT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9479be3a2201
|
40 | — | — | — |
|
CCGGAAATGCGTTATTTCCTGCCCTATCTCAGCGGAACAT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9e338b6854c1
|
40 | — | — | — |
|
AATCTAGAGGCCAAACAAGCTTCCGCTTCCGGTTTTCGCA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9347b85f1f16
|
40 | — | — | — |
|
ACGTAAATGGTGACGAACCATTTCCGGCTCAGGACCACCA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:a4819f350d93
|
40 | — | — | — |
|
ACCGGAAATCCGTAACGTAACGTAAACATATCTTCAAGTG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:65c52ba87b71
|
40 | — | — | — |
|
TAGCAAACGGAAGTCTAGACTTATCGTTCGCTGGCAAACA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:64ecad5a7972
|
40 | — | — | — |
|
CCGGAAGCCACCAATACCCATATGGTACCACTGACTTCCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:19113994b037
|
40 | — | — | — |
|
GCCACTACTACCGTTAAGTAATCCTGACTTCCGGTACGCA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:71b00da456cc
|
40 | — | — | — |
|
TGCACGTATTTATCGGGCGCGACCGGATATACGTGGACTG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9f6e48152d9d
|
40 | — | — | — |
|
TACGAGCAACCCGAACCACAGCTTCCGGTTGCAGCACCCT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:f861a6e90625
|
40 | — | — | — |
|
TGCGCCGCTTCCGGTTTGGAAATGCTGTCTTGTCCTTATG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:182a703e6f4a
|
40 | — | — | — |
|
TCTAACCCTCCATCTACTTCCGTTGTGCCTACTTCCCGTA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:f88f7f63c652
|
40 | — | — | — |
|
TAACTGGAATTCCGGTTCCTGTTGCTCATTACCATGTACG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:070029887ba5
|
40 | — | — | — |
|
GAGAGCCAAAACGGAAGTAATGCATCCGGGTGCGAAGCTG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:7d8bc23b79a0
|
40 | — | — | — |
|
CCGGATATCCGCTGACCCCGATAACCGGAATCGCACCGTC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:7bca6688e43e
|
40 | — | — | — |
|
GACGCCCTTGGTGATTGAAGGAGCGGTGTCTAGGGCTAAT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:18b714d5a475
|
40 | — | — | — |
|
TTACGTCCATGACCGGAAGTGTGACTTCCGCTTTTGTCTT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:a7b34cc790cc
|
40 | — | — | — |
|
GTTAAGCTTTCTTCCGGTTCCGGCGACCATGAATTGGTCT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:ce2e4c716904
|
40 | — | — | — |
|
CGACCTCACCGGAAGCTTAAGAGGATATGGTCACCATGCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:4eb74d5a3800
|
40 | — | — | — |
|
GATGTTTCCGGTTTGCGCGGAATAGAGATGGAATGCGGAA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:7c7148c6d90c
|
40 | — | — | — |
|
TAGCGATAGGCGGTCAGGTATAGAGGTACTTCCGGTACTA
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9bb1731cc069
|
40 | — | — | — |
|
CAGGTAATAGTTCCGGTTATGCATCCTGCATCCGACAATT
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:2d71de635720
|
40 | — | — | — |
|
GGTGCCACATTTCCGTAAGATCTGCTCTTCCGGCAACGCG
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:9ca003dae7d6
|
40 | — | — | — |
|
GTGAGTGTACCGTAAGTGGATTGTTCCCCACTTCCGGCGC
PANAPTA:Q06546:GABPA_NANOG:PRJEB66722:R3:37fc81a19805
|
40 | — | — | — |
SELEX rounds
R3 ·final