GABPA_NKX2-3
CAP-SELEX sample NKX2-3_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CACTGGCGAAACGACTACCGTAAGTGTCACTTCCGGAGGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:62a72db836e4
|
40 | — | — | — |
|
CCGGAAGCGAACTTCCGGTGAGCCCAATGCGCCGCTAATC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:6533660e8329
|
40 | — | — | — |
|
GCACCACGGTAAGTAAGTTCCACAACTTCCGGTCATCCTC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:5fb927681df0
|
40 | — | — | — |
|
TTCTACCACGTTTCCGGCAGGTCTTTCCGTAAACTGAAGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:1376f7390f49
|
40 | — | — | — |
|
ACAGCGAGATCGCTTACGGGATATCTTCAACCGGAAGCGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:a653466849b2
|
40 | — | — | — |
|
CCACCTTCCTCCCCCCGCCCTGCCCTACCCTTCATCTCGG
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:8f874c65f5b5
|
40 | — | — | — |
|
TTGAGTTTAGAGCGCCCTCGCACGCACTCCCCTTCCGTCA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:e70762fa45d8
|
40 | — | — | — |
|
TTGTGACTCCTAGCGCACCACGTCTATACCACTTTCTCCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:afba033e40b6
|
40 | — | — | — |
|
CCACCACCACCACTCCACACACCTTCCGGCCCCCCCACAC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:40e9afab70c9
|
40 | — | — | — |
|
CGCAAGCTATACCACACGTATCCCTTGCGAGTGTTCACGG
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:08c7dd3671d7
|
40 | — | — | — |
|
CTGAACTCCATCTGCTCATACAGCTCGATCTTCACCACTG
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:0336977129a7
|
40 | — | — | — |
|
ACGTACGACGGCTCTACCCCACTTCCGCCGGATGTCAAGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:ac775ff780ec
|
40 | — | — | — |
|
GCGATGCAGTCTCCACCCTCCGTTCGTTCTTCTACCCGGT
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:b21a11d5bcd9
|
40 | — | — | — |
|
ACGCCTCCACCGGATTTCACGTAAGCACCCCCTTCCGGTA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:4773cc2eacfc
|
40 | — | — | — |
|
CCCCAATCTCGCCATTCCTGTATCCGGTACGCTACCTGCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:c358b032bd8c
|
40 | — | — | — |
|
TGCCCACTTCCCCCTGTTACCGCTGCACACCTAGCGTACC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:8dc90025ff7e
|
40 | — | — | — |
|
CCATCTCATCTTATGTATGTGAACGAATATACTCCACGAC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:f7ab2d2b5230
|
40 | — | — | — |
|
ACGTCGGCCACCACTACACGTTGCACATAACCTGTCCAGA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:0c9af67c2f1b
|
40 | — | — | — |
|
CCATCCCCTACGAACCGGACGTACTCCACCCACTTCGCCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:ddf47cf7a030
|
40 | — | — | — |
|
CCCCAAACCGGAAATGCAACTGGCCTTCACTCACAGTTGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:b5983cd3c4ca
|
40 | — | — | — |
|
CACACGTCGCCCCGACCCCTTAGCACACGCCACCCCTATC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:09bd4e09ac72
|
40 | — | — | — |
|
CTAATTGCGCTATCTTACCATTCACGCCCTTGTTCCTTGA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:9b9eff187acd
|
40 | — | — | — |
|
CTTGAAGCCCTCCTCATTTCCTGATTTCACTTGTTACTCA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:f88faf397b84
|
40 | — | — | — |
|
CCCTCGCTCGTACCCCATTTCCTATGCTCTCACTTCCGCT
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:85b6d833a864
|
40 | — | — | — |
|
CCCTACTTCCGGCCGCTTACTTCAGGCCCCCTCACACATC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:70981944b5e1
|
40 | — | — | — |
|
TTACCCACACACCGTTGCGCACTTCCGTCTAAACAGCCCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:59134750bc52
|
40 | — | — | — |
|
CTTATGGTAATCTGTCGCCCAGGCACTCTAATTTGTAGGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:d19348b866df
|
40 | — | — | — |
|
GCACGTCCGGTGAATGCCGTAAGTTAGATCTAATCACAAG
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:e96375be8c15
|
40 | — | — | — |
|
CCTTGTCCGCGTCCGACCTGCCCTCACTTATTCGCCACTC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:3cce33ae1917
|
40 | — | — | — |
|
GCGCAGCATGATCCATCTGATAACCACGCACTTCACGTTC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:be5ed6f68315
|
40 | — | — | — |
|
CTTGCCCTTCCATACTGCCCCACATTCAGCACTCCTTCCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:9bdc519f91bf
|
40 | — | — | — |
|
AGGCCACTTCCCTTACGCGAGTCGTTATCCTCAAGCTCCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:f0f94e833699
|
40 | — | — | — |
|
AAGTGGCACTAACGGTAGCCGAGCACTCCCTATCTACGTC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:801876c0c504
|
40 | — | — | — |
|
CCTTACGCATGATTCCACCGCCATGATCGCGCAACAACAC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:5b6dbe620a22
|
40 | — | — | — |
|
CATCCACTTCCGCGAGTACCGCCCATCCAACCATCCCTCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:8e09a0a200fc
|
40 | — | — | — |
|
CCGTCATGCATTTCACCATACCCTCCTTCCGCACCGTCGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:ef8539f05436
|
40 | — | — | — |
|
CGCCTCCTCCCTCCCCTCACCCTCCCCCAACCAACCACCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:abd48a82bf86
|
40 | — | — | — |
|
TCTATCACTTCCGCTGGGCCGTTTGGCACACTTCCGTATC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:7531b1a8c9c8
|
40 | — | — | — |
|
CCACAGCTCGCTCCGTATCGACCACTTTGATCCCCTCTGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:74366741644b
|
40 | — | — | — |
|
TCGAACCACTTCCGCCTTCCACTTGGATCTCACCCTCGCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:9774ae5c5358
|
40 | — | — | — |
|
TCGCCAACATCCCACCGGAAGTATCCAACGGCCCGATTGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:73cf044c3517
|
40 | — | — | — |
|
CAGTCCACGCCCCTTAGCAGAGTCCCAAGGAACCCCACTT
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:ab8f801eae0b
|
40 | — | — | — |
|
GCGTTACAATGTCGCAACGGTGCAAACCACCCTTAAGTGT
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:87991ec93deb
|
40 | — | — | — |
|
CTTCCGGTCCCATCGCTACTAAGATGCGCGCACCACGCGC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:069e0a6f8727
|
40 | — | — | — |
|
CACTTCCGGTTTGCATGCTGTTCCGGAAATGATCGTCTGA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:bd1921d95415
|
40 | — | — | — |
|
CCAAACTAGCACGTTACTTGACATTTAAGCCGACCACTTG
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:98181172c61e
|
40 | — | — | — |
|
CCGCCCCCTGTCACCTCGCCTGCATCAACTGTTTCTCACT
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:54ef164ec5fb
|
40 | — | — | — |
|
TCACACCCTGTCCCCCTCACTCACTGCCCATGCCTGCCCA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:c8fbfb298eeb
|
40 | — | — | — |
|
CCGCCCCCATGCGGTTCCAGCCCCTCAGTCTTTAACCCAA
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:caae4113ecb5
|
40 | — | — | — |
|
CACCCGCACCCAGCGCTCGCCGACCCCGCTCTCGTGTTCC
PANAPTA:Q06546:GABPA_NKX2-3:PRJEB66722:R3:82cdc2c840bd
|
40 | — | — | — |
SELEX rounds
R3 ·final